| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_2990 |
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| Symbol | |
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| ID | 4014337 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 3144972 |
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| End bp | 3148733 |
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| Gene Length | 3762 bp |
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| Protein Length | 1253 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637942655 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_549802 |
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| Protein GI | 91788850 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.450084 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.707823 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGTGGC CCTGGCAAGA CGCGCCCTTC CGGCAGTCCC ACTTCCCACG AGATTCCGAG
CAGCATGCAT CCGTGGGACG CCAGATCATC TGGACGGCCA CCGCCCTCAT CGTCTTTTCG
GGCTGTGCCG TAGCCGTCGC GCTGTTCCAC CTTCGAAACG AAGCCCTTCG CTCCGGTGAG
AAGCTGACCC AGTCGCTGGC GCAGGTGATT GCGGAACAGA CCAGTCGTAC CTTTCAGGCC
GCCGACCAGC GCCTGCAGCT GGCAGCCAGC CGGCTGCAGG CGCTCGACGC GGAAAAGCGG
CTGACGGAGG AATCAGTCAG AGCGTTGCTG CGCGAGCAGC TCAGGGGGCT GCCTTTCGCA
CGCGCGATCT GGGTGCTGGA TCGCCAGGGC CGCACTGTTT TTGATTCGGA CACCGGCAAC
ATCGGCACCC AGCTGGCGGA CCGCGAGTAT TTCCAGGTCT ACAAGCAGCG CCCGGCCACG
GGCTTTCACA TCAGCGCTCC GGTGCGCAGC CGCTCTACCG GCACCTGGCT GATCAGCACC
TCGCGACCCT TGCGCTCGGC CAACGGAGAG CTGACGGGGG TGATCGTCGC AGCCGTGGAG
CCGCCCTATT TCGACACCCT CTGGCGGGAC ATCGACCTGG GCGCAGGCGG TGCGATCGCA
CTGTTTCGCA GCGATGGCCT GCTCATGATG CGCAGCCCGG TTGATGAGCA GGCCATGGGC
AGGATTTTCT CCACCCTGCC CCTGTTCACC GAACGGCTTT CCAACGGACC GCAGGGCACA
TTTACGGCCA CCAGCGCAGT CGATGCCCAT GTACGCATCA TCTCTTACCG CACACTGTCA
CCGTACAGCG ACATGCTCGT CACGGTTGGC CCCTTGTACG ACGACGTGCT GGCACCCTGG
AGACGCTTTG CCGGGCTGTC ATTCCTGATC TGGCTGGCCG CTGTGGCCAC GGTGGTCCTG
CTGTCGGTGC TGCTGTACCG GCAGTCGCGC CTGCGCGCAG GCACCGAATT GCGCTTTCGC
CAATTGGCGC AAGCCATGCC GCAAATTGTG TTCATCACCG ATGGCAACGG GCGGCTGACC
TTCGTCAGCG ACCAATGGAG CGAGGTAACC GGCGAGCCTC TGGACGTAGC GCTGAAAGGC
GGCTGGCTCG ACCGGATCCA TCCCGATGAC CTGCAAAGAG CCACAGACTG TATGCGGCAC
ATGCTGGACA CCGGCGAGAG TATCCGCAAC GAACATCGCC TGCGCTGCAA GGACGGCAGC
TACCGCTGGC AGCTGGTACG CGCCACGCCA AATCGCGACC GCAGCGAACG CATCGTCTCC
TGGTACTGCA CCTCGACGGA TATCGACGAG CTGAAGCAGG CCGAAGCGAC ACTGAAAGCC
CAAACCGGCT TGATGCAAAT GGCCGGGCAA ATTTCCAGGC TCGGCGGCTG GGCGCTGGAG
GTGCCCGAGA TGCGTGTCCT CTGGTCTGAT GAGGCCTCCG CCATTCTTGG GCTACCGAAG
GGCAGCGCAC CAACACTGGA ATCGGCCATT GGTCTTTGCG AGCCAGAGTG GCGCGAACTG
GCAACGCGGG TCGCGCAGGC TTGCCTGAAT CACGGCACGC CTTTCGATGT GGAAGTGAAG
ATGCTCACGC CCGCCGGGCG CAGTGTCTGG ATCCGCTCGA TGGGCCAGGC GGTGCGCGAT
GGCAGCGGCA GCATCACGCG CATGCAGGGC GCGCTGCAAG ACATCACAGA GCACAAGCTG
GCCGCACAAA CCCTGCTCGA AAGCGAGCAG CGCCATGCGG CCTTGTTCGA TACCGCGCCC
GTTCCGATGT GGGTAATGGA CAGGAAGGAC CACCACTACA TTGCCGTCAA CGACACCGCG
ATCCAGCTCT ACGGCTATTC GCGCGAAGAA TTTGTCGTCA TGACACCCCT GCAACTGTTG
TCCGCGGCAG AGCATCCCCG CATGCAGCAC CTCATGACGA CCGGGCTGCC AATGGACACG
CCCGAGTTCT GGATGCACCG GCAAAAAAAC GGCACCGAGT TTCCGGTGGA AGTGATTCGC
CGCGTGATCC GCTACGGTGG GCGGGACGCG GTATTCGCTG TGGCGTTCGA CATCACCCTG
CGGGTCCGGG CCGAACAGGA GGTACAGGCT TACCTGCTGA CCCTGCAACG CGTTGCGGAT
GCCACCCAGA CCATCACACA GCATCAGTCG CTGGACACCA TGATGCAGGA AGCGGCCGAG
CAGTCCCGCG CCATCATCGG CGCCCATCAG TCGGTCATCA GCCTGCCGCG TGACGGCCAT
CGCTCGCAGG CCATCACGGC CCGGTCGCTG TCTGAAAAAT ATGCGGGGCA GCCGCACTGG
AGCGACAGCC CCGAGGAAAG CGGCATCCAT GCGATGGCCT GCGAGACCCG GCGCGCCGTG
CGGCTGACGC AGGCCGAGCT GGAGGCCGAT CCGCGCTGGT GCGGGATCAG CAAATCCTCC
GAGCCCTGCC GGACCCTGCG CGGCTGGCTT GCCGTGCCAC TGACAGGCCG CGATGGCGCC
AATATCGGCT GGCTGCATCT GTCGGACAAG TTCGTGGGCG AATTCAACCT GCAGGACGAA
TACGTGGCCA CCGAACTGGC CCAACAGGTC TCGATCGCGA TTGACAACTT GCACCTGTTG
TCCCAGGTCA AGGAGCTGAA CAGCGGGCTG GAGGAAAAGA TCATCCAGCG CACCGGTGAG
CTGTCGCGCC AGGAGGCGCT GTTCCGGACG CTAGCCGAAC AGGCTCCCCA GCCGATCTGG
ACTGTCGATC CGCGGGGCGC CGCCACCTTT TTCAGCCGGG CCTGGTACGA GCTCGTCGGC
GGTGCACCGC CCGACTGGCA CGGCCACGCC TGGGTCGGGC TTGTGCATCC GGACGACGTG
GTCGCGGCGA CGCAGAACTG GCGGGAGCCC AGCGCAGAGC CCACCCTGAT TACCGGCACG
CGGCGGCTGC GTGCCAGGAG CGGGGCCTAC CACACGATGT CGTACCGCGC CTCGCCGGTG
AGCAATGAAC ACGGCGAGGT GATCTTCTGG GTAGGCGTCG ATACGGACAT CACCGAGATC
AAGGCGATCG AGACCGCCCT GCGACTGTCC AACGCAGAGC TCGAAGCCTT CTCGTACTCG
GTCTCCCACG ACCTGCGTTC GCCGCTGACG ACGGTAGACG GTTTCAGCCG CCTGCTGGCC
AAGGAACTCA AGGACAACCC GGGCAAGAAG CTACAGCACT ACCTCACCCG AATACAGTCC
GGTGTCGGCC AGATGGGCCA GTTGATAGAA GCCCTGTTGT CGCTGGCGCA TGTGGCGCGC
CTGGAACTTC GGCGGGAACC TGTCAACCTG AGCGTCCTGG CCAACGAGAC GCTTGAGCGA
CTGAAAGCCG GCGATGGCGC GCGCCAGGTG GATTGCAGCG TCGAGCCTGG GCTGCTGGTG
CATGGTGACG GCCGGCTGCT TCGCTCCGTC ATGGAAAACC TGCTGAGCAA CGCCTGGAAG
TTCAGTTCGC GCCGGCCCCG GGCCACGATT GCGGTTGGCC GGTCAACGGC ACATGACGCG
TTCTTTGTGC GCGACAACGG CGCCGGCTTC GACATGGCCT ATGTCGACAA GCTGTTCGGC
ACCTTTCAGC GTCTGCACAG CGTGTCGGAA TACACCGGAA CCGGTGTCGG CCTCGCGACC
GTGGCCCGGG TGATTGCGCG CCACCGCGGC CGGATCTGGG CCGAGTCGGC GCCGGACAAG
GGGGCGACAT TCTTCTTCAC GCTGCCGGGC GAGGAGTTTT GA
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| Protein sequence | MRWPWQDAPF RQSHFPRDSE QHASVGRQII WTATALIVFS GCAVAVALFH LRNEALRSGE
KLTQSLAQVI AEQTSRTFQA ADQRLQLAAS RLQALDAEKR LTEESVRALL REQLRGLPFA
RAIWVLDRQG RTVFDSDTGN IGTQLADREY FQVYKQRPAT GFHISAPVRS RSTGTWLIST
SRPLRSANGE LTGVIVAAVE PPYFDTLWRD IDLGAGGAIA LFRSDGLLMM RSPVDEQAMG
RIFSTLPLFT ERLSNGPQGT FTATSAVDAH VRIISYRTLS PYSDMLVTVG PLYDDVLAPW
RRFAGLSFLI WLAAVATVVL LSVLLYRQSR LRAGTELRFR QLAQAMPQIV FITDGNGRLT
FVSDQWSEVT GEPLDVALKG GWLDRIHPDD LQRATDCMRH MLDTGESIRN EHRLRCKDGS
YRWQLVRATP NRDRSERIVS WYCTSTDIDE LKQAEATLKA QTGLMQMAGQ ISRLGGWALE
VPEMRVLWSD EASAILGLPK GSAPTLESAI GLCEPEWREL ATRVAQACLN HGTPFDVEVK
MLTPAGRSVW IRSMGQAVRD GSGSITRMQG ALQDITEHKL AAQTLLESEQ RHAALFDTAP
VPMWVMDRKD HHYIAVNDTA IQLYGYSREE FVVMTPLQLL SAAEHPRMQH LMTTGLPMDT
PEFWMHRQKN GTEFPVEVIR RVIRYGGRDA VFAVAFDITL RVRAEQEVQA YLLTLQRVAD
ATQTITQHQS LDTMMQEAAE QSRAIIGAHQ SVISLPRDGH RSQAITARSL SEKYAGQPHW
SDSPEESGIH AMACETRRAV RLTQAELEAD PRWCGISKSS EPCRTLRGWL AVPLTGRDGA
NIGWLHLSDK FVGEFNLQDE YVATELAQQV SIAIDNLHLL SQVKELNSGL EEKIIQRTGE
LSRQEALFRT LAEQAPQPIW TVDPRGAATF FSRAWYELVG GAPPDWHGHA WVGLVHPDDV
VAATQNWREP SAEPTLITGT RRLRARSGAY HTMSYRASPV SNEHGEVIFW VGVDTDITEI
KAIETALRLS NAELEAFSYS VSHDLRSPLT TVDGFSRLLA KELKDNPGKK LQHYLTRIQS
GVGQMGQLIE ALLSLAHVAR LELRREPVNL SVLANETLER LKAGDGARQV DCSVEPGLLV
HGDGRLLRSV MENLLSNAWK FSSRRPRATI AVGRSTAHDA FFVRDNGAGF DMAYVDKLFG
TFQRLHSVSE YTGTGVGLAT VARVIARHRG RIWAESAPDK GATFFFTLPG EEF
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