Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_2963 |
Symbol | |
ID | 4014382 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | - |
Start bp | 3124687 |
End bp | 3125700 |
Gene Length | 1014 bp |
Protein Length | 337 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637942626 |
Product | TRAP dicarboxylate transporter, DctP subunit |
Protein accession | YP_549775 |
Protein GI | 91788823 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.247668 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.87338 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAAGCT CAATATCCCG GCCTGGCGGC TGGAAGGTCA TCAGGCTTGT GCCGGCGTGG GCCGCCCTGG CTTTGCTGGC TTTGGGTTCG GCCTTCGCGG AGCCGCTGCG CGTTGCGGGA AACTTCGCAG CGAATCACTC CAGCAGCCTG GCAATGGCCC AGTTCAAGCT GGACGTCGAA AAGGTCTCCA GCGGGCAGAT CCAGGTCGAG GTCTTCCCGG CCATGCAGTT GGGCAGTGCC CAGGACAATG TGGACCAGGT TCGCAGCGGG AAGCTGTTCA TGACCTGGAT CTCGACCGCC TATCTCTCGC GCACCGTCCC GGAGCTGTCG GTACTCAGCA TTCCATTTTT GTTTACCGAC CGTCAGCTCG CCTTCAAGGT CGTCGACGGC AAGGTTGGCG CCATGCTGGG AGGCAAGTTT GCCGCCAAAG GTTTTTTACC CCTGGGCTTC ATGGAGTTGG GGCCACGTCA GCTGACCAAC AGCCAGCGGC CGGTCCGCTC GATCACCGAT TTAAAAGGGC TGAAGCTGCG TCTGCAGCCG GATGAAATTC ATATCGCGAC GTTTCAGGCG CTGGGCGCGA ACCCGGTGAA GATGGACATC AAGGAGGTTT ATGGCGCGCT GCAGTCCGGT GCGCTGGATG CCCAGGAAAA TCCCTTTGCC GTAATTCGGG ACAGGAACTT CCATGAGGTG CAGAAATACC TGACCAACAC CTCGCATTTT TTCGATTTCA TCGTGCTGGT CGCCAACAAG CAAAGGTTCG AAGCGCTCAA GCCGGAGCAC CAGAAAATCA TCCAGGACGC GGCCACCAAG GCGGTCATCG CGCAGCGGAC CTCTGCCGCC GCGGAAGATA TCGGCGCGAT TGTCGATCTG GCAAACAGGG GCATGAAGTT TGAACCCGTG CGCCCTTCGT TCCGGGCCGA CATGCGCAAG GCGACGGAAG GTATCGTCGA CAGCGTGCGC CAAAAAGCCG GCGCGGACCT CGTTCAGGCT ACCCTGGACG CCGCCGTGCG ATAA
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Protein sequence | MRSSISRPGG WKVIRLVPAW AALALLALGS AFAEPLRVAG NFAANHSSSL AMAQFKLDVE KVSSGQIQVE VFPAMQLGSA QDNVDQVRSG KLFMTWISTA YLSRTVPELS VLSIPFLFTD RQLAFKVVDG KVGAMLGGKF AAKGFLPLGF MELGPRQLTN SQRPVRSITD LKGLKLRLQP DEIHIATFQA LGANPVKMDI KEVYGALQSG ALDAQENPFA VIRDRNFHEV QKYLTNTSHF FDFIVLVANK QRFEALKPEH QKIIQDAATK AVIAQRTSAA AEDIGAIVDL ANRGMKFEPV RPSFRADMRK ATEGIVDSVR QKAGADLVQA TLDAAVR
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