Gene Bpro_2948 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_2948 
Symbol 
ID4014406 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp3110290 
End bp3110718 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content60% 
IMG OID637942611 
Productbiopolymer transport protein ExbD/TolR 
Protein accessionYP_549760 
Protein GI91788808 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0848] Biopolymer transport protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTTTC GCCCTCACCC GCATGATGAA CCGGAGATCA ACCTGATCCC CTTTATCGAC 
GTGTTGCTTG TTGTGCTCAT CTTCCTGATG CTGTCGACAA CCTACAGCAA GTTCACCGAA
CTGCAGGTAA AACTACCGGT AGCCGACGCT GAACAGCAGC GCGACTACCC CAAAGAGGTG
ATCGTCGCAG TCAGCAGCGA TGGCCGCTAC ATGGTCAACA AGACCCTGGT GGAAGGCCGC
GGGATCGGGG TGCTCGGTGC GGCACTGGTC GAAGCGGCCA AAGCCGGCAA GGACAGCATC
ATCATCATCA GCGCCGATGC CAGCGCCACG CACCAGGCGG TCATCACCGT CATGGAAGCG
GCCCGCCGCC AGGGGCTGAC GCAGATCACC TTTGCCACCC AAAGCAGCGC CATGGCCGGC
GCGAAATAG
 
Protein sequence
MNFRPHPHDE PEINLIPFID VLLVVLIFLM LSTTYSKFTE LQVKLPVADA EQQRDYPKEV 
IVAVSSDGRY MVNKTLVEGR GIGVLGAALV EAAKAGKDSI IIISADASAT HQAVITVMEA
ARRQGLTQIT FATQSSAMAG AK