Gene Bpro_2947 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_2947 
Symbol 
ID4014405 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp3109524 
End bp3110162 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content62% 
IMG OID637942610 
ProductMotA/TolQ/ExbB proton channel 
Protein accessionYP_549759 
Protein GI91788807 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0811] Biopolymer transport proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTTTTCGA TCATACAAGC CGCAGGCTGG CCGATATGGC CTTTGCTTGC CTGCTCCGTC 
TTGGCGCTTG CGCTGGTCAT TGAGCGTTTT ACCAGCCTGA AAACCCCCAA GGTCGCGCCG
CCAAGACTGC TTGACGAAGC CATCACGGTC TCCCGTTCCG CCGTACCGGC GCCAGAGGTG
GTGTCGCAAC TGGAACAAAA CTCGGTTCTT GGCGAGGTGC TGGCCAGCGG GTTTCGTGCC
CTGAACGCCA ACCCGCGGAT CAGCGAGGAC GATTTGCGCT CCATCCTGGA GGGAGCCGGT
CGCCAGGCAG CCCACAAGCT GGAGCGTTAC CTGGCCGCCC TGGCCACCAT TGCCTCTGCT
GCGCCCTTGC TGGGACTGCT GGGCACCGTC ATCGGCATGA TCGAGATTTT CGGCGCCCAA
GCTGGTGCCG GCGGCGTCAG CAGTTCCGGC GGCGGTAACC CGGTGCAGAT GGCGCAGGGT
ATCTCGATCG CCCTGTACAA CACCGCATTC GGGCTGATGG TGGCCATACC ATCCCTGATT
TTCTGGCGCT ATTTCCGGGC CCAGGTTGAC GGTTACCTGC TCACGATGGA GCTGGCTGCG
GAGCGCTTCG TGCGCCACCT CAATACGCTG CGGAAATGA
 
Protein sequence
MFSIIQAAGW PIWPLLACSV LALALVIERF TSLKTPKVAP PRLLDEAITV SRSAVPAPEV 
VSQLEQNSVL GEVLASGFRA LNANPRISED DLRSILEGAG RQAAHKLERY LAALATIASA
APLLGLLGTV IGMIEIFGAQ AGAGGVSSSG GGNPVQMAQG ISIALYNTAF GLMVAIPSLI
FWRYFRAQVD GYLLTMELAA ERFVRHLNTL RK