Gene Bpro_2942 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_2942 
Symbol 
ID4014400 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp3104732 
End bp3105985 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content60% 
IMG OID637942605 
Productisocitrate dehydrogenase 
Protein accessionYP_549754 
Protein GI91788802 
COG category[C] Energy production and conversion 
COG ID[COG0538] Isocitrate dehydrogenases 
TIGRFAM ID[TIGR00183] isocitrate dehydrogenase, NADP-dependent, prokaryotic type 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.549514 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACCAGC ACATCAAGGT GCCCGCCCAA GGCCAGAAAA TCACCGTCAA TGCCGACAAT 
TCACTGAATG TGCCTGACGA GCCGGTCATT CCGTTCATTG AGGGCGACGG TACCGGCGCA
GACATTACGC CGGTCATGCT GAAAGTGGTG GATGCAGCCG TGGCCAAAGC CTACGGCGGC
AAGAAGAAGA TCCACTGGAT GGAAGTGTTT GCAGGTGAGA AGTCCACCAA GGTGTACGGC
CCGGACGTCT GGCTGCCGGA AGAAACGCTG CACGCCGTGC GCGACTACGT GGTGTCCATC
AAGGGCCCGC TGACGACCCC CGTGGGCGGC GGTATCCGCA GCCTGAACGT GGCATTGCGC
CAGGAGCTGG ACCTGTACGT CTGCCTGCGC CCCATCCAGT ACTTTGCCGG CGTGCCTTCC
CCCGTGAAAG AGCCGCAAAA GACCAACATG GTCATCTTCC GTGAAAACTC GGAAGACATC
TACGCCGGTA TCGAGTTCGA ATCGGGCAGC GACAAGGCCA AGAAACTCAT CAAGTTCCTG
CAGGATGAAC TGGGCGTCAA GAAGATCCGC TTCCCCAACA CCTCCGGCAT CGGCATCAAG
CCGGTCTCCA GCGAAGGTAC CGAGCGCCTG GTGCGCAAGG CCATCCAGTA CGCGATTGAC
AATGACAAGC CCAGCGTGAC CATCGTTCAC AAGGGCAACA TCATGAAATT CACCGAAGGC
GGTTTCCGTG ACTGGGCCTA CGCCCTGGCG CAAAAGGAAT TCGGTGCCGA ACTGATCGAC
GGCGGCCCAT GGTGCAAGTT CAAGAACCCG AAGACCGGCA AGGACGTCAT CGTCAAGGAC
AGCATTGCCG ACGCCTTCCT GCAGCAAATC CTGCTGCGCC CGGCCGAGTA CAGCGTGATT
GCGACGCTGA ACCTGAACGG CGACTATGTG TCCGACGCCC TGGCTGCACA GGTCGGCGGT
ATCGGCATTG CCCCCGGCGC CAACCTGAGC GACACCGTGG CCATGTTCGA GGCCACCCAC
GGTACCGCTC CGAAATATGC TGGCAAGGAC TATGTGAACC CCGGCTCCGA GATCCTGTCC
GCAGAAATGA TGCTGCGCCA CATGGGCTGG ACCGAGGCGG CCGACCTGAT CATCAGCTCG
ATGGAAAAGT CGATTGAATC CAAGAAAGTC ACCTACGACT TTGCCCGCCT GATGGAGGGC
GCGACCCAGG TCAGCTGCTC CGGTTTCGGC CAGGTGATGA TCGATCACAT GTAA
 
Protein sequence
MYQHIKVPAQ GQKITVNADN SLNVPDEPVI PFIEGDGTGA DITPVMLKVV DAAVAKAYGG 
KKKIHWMEVF AGEKSTKVYG PDVWLPEETL HAVRDYVVSI KGPLTTPVGG GIRSLNVALR
QELDLYVCLR PIQYFAGVPS PVKEPQKTNM VIFRENSEDI YAGIEFESGS DKAKKLIKFL
QDELGVKKIR FPNTSGIGIK PVSSEGTERL VRKAIQYAID NDKPSVTIVH KGNIMKFTEG
GFRDWAYALA QKEFGAELID GGPWCKFKNP KTGKDVIVKD SIADAFLQQI LLRPAEYSVI
ATLNLNGDYV SDALAAQVGG IGIAPGANLS DTVAMFEATH GTAPKYAGKD YVNPGSEILS
AEMMLRHMGW TEAADLIISS MEKSIESKKV TYDFARLMEG ATQVSCSGFG QVMIDHM