Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_2942 |
Symbol | |
ID | 4014400 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | - |
Start bp | 3104732 |
End bp | 3105985 |
Gene Length | 1254 bp |
Protein Length | 417 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637942605 |
Product | isocitrate dehydrogenase |
Protein accession | YP_549754 |
Protein GI | 91788802 |
COG category | [C] Energy production and conversion |
COG ID | [COG0538] Isocitrate dehydrogenases |
TIGRFAM ID | [TIGR00183] isocitrate dehydrogenase, NADP-dependent, prokaryotic type |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.549514 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTACCAGC ACATCAAGGT GCCCGCCCAA GGCCAGAAAA TCACCGTCAA TGCCGACAAT TCACTGAATG TGCCTGACGA GCCGGTCATT CCGTTCATTG AGGGCGACGG TACCGGCGCA GACATTACGC CGGTCATGCT GAAAGTGGTG GATGCAGCCG TGGCCAAAGC CTACGGCGGC AAGAAGAAGA TCCACTGGAT GGAAGTGTTT GCAGGTGAGA AGTCCACCAA GGTGTACGGC CCGGACGTCT GGCTGCCGGA AGAAACGCTG CACGCCGTGC GCGACTACGT GGTGTCCATC AAGGGCCCGC TGACGACCCC CGTGGGCGGC GGTATCCGCA GCCTGAACGT GGCATTGCGC CAGGAGCTGG ACCTGTACGT CTGCCTGCGC CCCATCCAGT ACTTTGCCGG CGTGCCTTCC CCCGTGAAAG AGCCGCAAAA GACCAACATG GTCATCTTCC GTGAAAACTC GGAAGACATC TACGCCGGTA TCGAGTTCGA ATCGGGCAGC GACAAGGCCA AGAAACTCAT CAAGTTCCTG CAGGATGAAC TGGGCGTCAA GAAGATCCGC TTCCCCAACA CCTCCGGCAT CGGCATCAAG CCGGTCTCCA GCGAAGGTAC CGAGCGCCTG GTGCGCAAGG CCATCCAGTA CGCGATTGAC AATGACAAGC CCAGCGTGAC CATCGTTCAC AAGGGCAACA TCATGAAATT CACCGAAGGC GGTTTCCGTG ACTGGGCCTA CGCCCTGGCG CAAAAGGAAT TCGGTGCCGA ACTGATCGAC GGCGGCCCAT GGTGCAAGTT CAAGAACCCG AAGACCGGCA AGGACGTCAT CGTCAAGGAC AGCATTGCCG ACGCCTTCCT GCAGCAAATC CTGCTGCGCC CGGCCGAGTA CAGCGTGATT GCGACGCTGA ACCTGAACGG CGACTATGTG TCCGACGCCC TGGCTGCACA GGTCGGCGGT ATCGGCATTG CCCCCGGCGC CAACCTGAGC GACACCGTGG CCATGTTCGA GGCCACCCAC GGTACCGCTC CGAAATATGC TGGCAAGGAC TATGTGAACC CCGGCTCCGA GATCCTGTCC GCAGAAATGA TGCTGCGCCA CATGGGCTGG ACCGAGGCGG CCGACCTGAT CATCAGCTCG ATGGAAAAGT CGATTGAATC CAAGAAAGTC ACCTACGACT TTGCCCGCCT GATGGAGGGC GCGACCCAGG TCAGCTGCTC CGGTTTCGGC CAGGTGATGA TCGATCACAT GTAA
|
Protein sequence | MYQHIKVPAQ GQKITVNADN SLNVPDEPVI PFIEGDGTGA DITPVMLKVV DAAVAKAYGG KKKIHWMEVF AGEKSTKVYG PDVWLPEETL HAVRDYVVSI KGPLTTPVGG GIRSLNVALR QELDLYVCLR PIQYFAGVPS PVKEPQKTNM VIFRENSEDI YAGIEFESGS DKAKKLIKFL QDELGVKKIR FPNTSGIGIK PVSSEGTERL VRKAIQYAID NDKPSVTIVH KGNIMKFTEG GFRDWAYALA QKEFGAELID GGPWCKFKNP KTGKDVIVKD SIADAFLQQI LLRPAEYSVI ATLNLNGDYV SDALAAQVGG IGIAPGANLS DTVAMFEATH GTAPKYAGKD YVNPGSEILS AEMMLRHMGW TEAADLIISS MEKSIESKKV TYDFARLMEG ATQVSCSGFG QVMIDHM
|
| |