Gene Bpro_2940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_2940 
Symbol 
ID4014398 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp3101796 
End bp3104132 
Gene Length2337 bp 
Protein Length778 aa 
Translation table11 
GC content62% 
IMG OID637942603 
ProductATPase AAA-2 
Protein accessionYP_549752 
Protein GI91788800 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0542] ATPases with chaperone activity, ATP-binding subunit 
TIGRFAM ID[TIGR02639] ATP-dependent Clp protease ATP-binding subunit clpA 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.206426 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.985404 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGCCC AGGAACTAGA AGTCAGCTTG CACATGGCCT TTGTCGAAGC GCGGCAGCAA 
CGTCACGAGT TCATCACGGT GGAACACCTG CTGCTCGCCT TGCTGGACAA CCCCAGTGCG
GCTGAAGTGC TGCGCGCCTG TTCAGCCAAT GTGGATGATC TGCGCAAGTC GCTTGCCAAT
TTCATCAAGG ACAACACGCC GCAGGTGGCA GGCACCGACG ACGTCGACAC GCAACCCACG
CTGGGTTTCC AGCGTGTGAT CCAGCGCGCC ATCATGCATG TGCAGTCCAC CGGCAACGGT
AAAAAAGAAG TCACCGGTGC CAATGTGCTG GTCGCCATTT TTGGCGAGAA GGATTCCCAC
GCGGTGTATT ACCTGCACCA GCAGGGCGTG ACGCGCCTGG ACGTGGTGAA TTTCATCGCC
CATGGCATCA AGAAAAGCGA TCCGCCCGAG CCCGCCAAGA GCGGCGAAAG CGCCGCCGAG
AACGAGGAAG GCAGCGAAAA GAACGAAAAG GCTTCTCCGC TGGAGCAGTT CACGCAGAAC
CTCAACCAGC TCGCCAAGGA TGGCAAGATC GATCCCCTGA TCGGCCGCCA GTACGAAGTC
GAGCGGGTGA TCCAGATTCT CTGCCGTCGC CGCAAGAACA ACCCGCTGCT GGTGGGTGAG
GCTGGCGTGG GTAAAACCGC CATTGCCGAG GGCCTGGCCT GGCGCATCAC GCAAAAAGAT
GTGCCGGAAA TCCTGGCCGA GGCGAACGTG TATTCGCTCG ACATGGGTGC CTTGCTGGCC
GGTACCAAAT ACCGCGGCGA CTTTGAGCAG CGCCTCAAGG GCGTGCTGAA GGCGCTGAAA
GACAAGCCCA ACGGCATCCT GTTCATTGAC GAAATCCACA CCCTGATCGG TGCCGGTGCG
GCCTCGGGCG GTACGCTGGA CGCGTCCAAC CTGCTCAAGC CTGCGCTGAG TTCCGGCCAG
CTCAAGTGCA TTGGCGCGAC CACCTTCACG GAATACCGCG GTATTTTCGA GAAGGATGCG
GCCCTGTCGC GGCGCTTCCA GAAGGTCGAT GTGGTCGAGC CGACGGTGCA GGAAACAGTC
GAGATTCTGA AGGGTCTCAA GTCGCGCTTT GAAGAGCACC ACAGCGTCAA GTACGCCGTG
GCGGCCCTGC AGGCCGCGGC CGAGCTGAGC GCCAAGTACA TCAATGACCG CCATCTGCCC
GACAAGGCGA TCGACGTCAT TGATGAGGCG GGCGCCGCCC AGCGCATCCT GCCCGCCAAC
AAGCGCAAGA AAACCATCAC CAAGACCGAG GTCGAGGAAA TCGTGGCGAA GATTGCCCGC
ATTCCGCCCG CCAACGTCTC CAATGATGAC CGCGGCAAGC TCAAGACCCT GGAACGCGAC
CTCAAAAGCG TGGTGTTCGG CCAGGACAAG GCGCTGGACG TGCTTGCGTC GTCTGTCAAG
ATGGCGCGTT CCGGCCTGGG CAAGGACGAC AAGCCGATTG GCTGCTTCCT GTTCTCCGGC
CCCACGGGTG TCGGCAAGAC CGAGGCCGCC AAGCAGCTGG CCTACATCAT GGGCATCGAG
CTGATCCGCT TCGACATGTC GGAGTACATG GAGCGCCATG CCGTGAGCCG CCTGATCGGC
GCGCCTCCGG GCTACGTCGG TTTTGACCAG GGCGGTTTGC TGACCGAGGC GATCACCAAG
AAGCCGCACG CGGTGCTGCT GCTCGACGAG ATCGAGAAGG CGCACCCCGA CATCTTCAAC
GTGCTGCTGC AGGTGATGGA CCATGGCACG CTCACGGACA ACAACGGGCG CAAGGCCGAT
TTCCGTAACG TGATCATTGT CATGACCACC AATGCCGGTG CCGAGACCAT GAACAAGGCG
ACCATCGGCT TTACCAACCC GCGTGAGGCG GGCGACGAGA TGGCGGACAT CAAACGCCTG
TTCACGCCAG AGTTCCGCAA CCGCCTCGAT GCGGTGGTGA GCTTCAAGGC GCTGGACGAA
GTCGTCATCC TGCGCGTGGT CGACAAGTTC CTGCTGCAGC TGGAGACGCA GCTGGCCGAG
AAGAAAGTCG AAGTCACCTT CACCGACGGG CTGCGCAAGT ACCTGGCCAA GAAGGGCTTC
GATCCGCTCA TGGGCGCTCG CCCGATGCAG CGCCTGATCC AGGACACGAT TCGTCGCGCG
CTGGCTGACG AGCTGCTGTT TGGGCGCCTG ATCGATGGCG GCCGCCTCAC GGTCGACATG
AAGGTCACGA CGGACGAGAA GGGCGTCGAG ACCGGCGAGG TCCAGCTCGA CATCCAGCCG
CTGCCGAAGA AAGAGGGCAA AGCCAGGCCC GAGGCGGAGG CCGCAGAGAC CAACTGA
 
Protein sequence
MIAQELEVSL HMAFVEARQQ RHEFITVEHL LLALLDNPSA AEVLRACSAN VDDLRKSLAN 
FIKDNTPQVA GTDDVDTQPT LGFQRVIQRA IMHVQSTGNG KKEVTGANVL VAIFGEKDSH
AVYYLHQQGV TRLDVVNFIA HGIKKSDPPE PAKSGESAAE NEEGSEKNEK ASPLEQFTQN
LNQLAKDGKI DPLIGRQYEV ERVIQILCRR RKNNPLLVGE AGVGKTAIAE GLAWRITQKD
VPEILAEANV YSLDMGALLA GTKYRGDFEQ RLKGVLKALK DKPNGILFID EIHTLIGAGA
ASGGTLDASN LLKPALSSGQ LKCIGATTFT EYRGIFEKDA ALSRRFQKVD VVEPTVQETV
EILKGLKSRF EEHHSVKYAV AALQAAAELS AKYINDRHLP DKAIDVIDEA GAAQRILPAN
KRKKTITKTE VEEIVAKIAR IPPANVSNDD RGKLKTLERD LKSVVFGQDK ALDVLASSVK
MARSGLGKDD KPIGCFLFSG PTGVGKTEAA KQLAYIMGIE LIRFDMSEYM ERHAVSRLIG
APPGYVGFDQ GGLLTEAITK KPHAVLLLDE IEKAHPDIFN VLLQVMDHGT LTDNNGRKAD
FRNVIIVMTT NAGAETMNKA TIGFTNPREA GDEMADIKRL FTPEFRNRLD AVVSFKALDE
VVILRVVDKF LLQLETQLAE KKVEVTFTDG LRKYLAKKGF DPLMGARPMQ RLIQDTIRRA
LADELLFGRL IDGGRLTVDM KVTTDEKGVE TGEVQLDIQP LPKKEGKARP EAEAAETN