Gene Bpro_2922 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_2922 
Symbol 
ID4014419 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp3085364 
End bp3086278 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content65% 
IMG OID637942585 
Productsigma-24 (FecI-like) 
Protein accessionYP_549734 
Protein GI91788782 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02957] RNA polymerase sigma-70 factor, TIGR02957 family 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.541212 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGACG CCACCGACAC ATTCAACCGC CTCCGCCCTC GCTTGCAGGG TATTGCCTAC 
CGCATGCTGG GCTCCTCGGC CGAGGCCGAA GAAGTCGTCC AGGATGCGTG GCTGCGATGG
CACGAGGCCG ACCAGGATCA CCTGGAGAAC ACGGAGGCCT GGCTCGTTTC CGTCACCACG
CGCCTGGCCA TTGACAGACT GCGCACGGCC AAGATCCAGC GCGAGCACTA TGTCGGCACA
TGGCTGCCGG AGCCCCTGCT CTCCGATTCC CCAGTCTCGC CGGAGCAGAT GCTGGAGCGA
GTCGACGACG TCTCGGTTGC CTTCCTCGCA CTGCTGGAGC GCCTTGCTCC CGAGGCCCGT
GCGGCCTATT TGCTGCGCGA AGTGTTTGAT GCCGACTATG GTGAAGTGGC CGAGGCCCTG
GGCAAGACCG AGCCCGCCTG CAGGCAACTT GTTCACCGCG CCAAGGTGCA GCTACAGGAC
CAGCGGCCGC GGTACACCGT CGCTCGAGAG ACCCAACTGC GGCTGCTGCG GGGGTTCGCT
GATGCTGCCG TGCGCGGCGA GTTCGCTGCG CTCAAAACCA TGCTTGCTGA CGACGCGCAG
CTGATCGGCG ATGGCGGCGG CAAGGTGCCC AGCTTTGGAG TCCCGCTGGT GGGCGGGCAG
CGCATCGCAC AGCTGTATCT CGCCACCAGC CTGCGCTACC CCAACCTGGT GCGATTCGAA
GTGGTTGTGC TCAATGGTCA ATGGGGCTTG CTGCGCTTCA TCGATGGCGC CCTGGAGTCG
GCGCAGTCGC TCGAAACGGA TGGGGAGCGC ATCGTGCGCA TTCACGCGCA GCGCAACCCG
GACAAGCTCG CCCGCATCGC CCAGGCATTG GGCCGCGATC TCAATGTCAC AAGTCAGCCC
CCTCAAACGT CTTGA
 
Protein sequence
MNDATDTFNR LRPRLQGIAY RMLGSSAEAE EVVQDAWLRW HEADQDHLEN TEAWLVSVTT 
RLAIDRLRTA KIQREHYVGT WLPEPLLSDS PVSPEQMLER VDDVSVAFLA LLERLAPEAR
AAYLLREVFD ADYGEVAEAL GKTEPACRQL VHRAKVQLQD QRPRYTVARE TQLRLLRGFA
DAAVRGEFAA LKTMLADDAQ LIGDGGGKVP SFGVPLVGGQ RIAQLYLATS LRYPNLVRFE
VVVLNGQWGL LRFIDGALES AQSLETDGER IVRIHAQRNP DKLARIAQAL GRDLNVTSQP
PQTS