| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_2893 |
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| Symbol | |
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| ID | 4014429 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 3052062 |
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| End bp | 3055634 |
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| Gene Length | 3573 bp |
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| Protein Length | 1190 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637942557 |
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| Product | DNA polymerase III, alpha subunit |
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| Protein accession | YP_549706 |
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| Protein GI | 91788754 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.580471 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGGTAA TCAGCAAAAT GCGCGTGGGC CCCAGCCCTA AAATGAAGCG CATGTTTGTC
CATTTACGTA TCCATACCGA GTTTTCAGTC GTCGACGGCA CCAACCGCAT TGATGAAATC
GTCCAGGCTG CCGCCGCAGA CCAGCAGCCG GCGCTGGCCA TTACCGACCT GAGCAACCTG
TTTGGCACGG TCAAGTTTTA CAAGGAAGGC CGCGGCGCCG GGGTGAAGCC TTTGATAGGC
GCCGACGTCT GGGTTCAGGT TCCAGGCAAA GATGCTGCGG CGCCTGCGGC CCGCCTGCTG
CTGCTGGTGC AAAACCACAG GGGTTACCTC AACCTGTCCG AGTTGCTCAC GCGCGCCTGG
ACCAGAAACG TGGTGCGCGA CCAGGCCGTG ATCAAGCTGG AATGGCTTGA AGAGCTGAAC
GAGGGCCTGA TTGCGCTGTC GGGTGCCCAG GGGGGCGCCG TGGGCCAGGC CCTGCTTCAG
GGGGACGACG CACGGGCGCT GGAATGCGCC CTGCACCTGG CGGGTCTGTT TCCCCACCGC
TTTTACCTGG AGCTGCAGCG CGCCCAGCGC CCTGACGACG AGCGCCATGT GGCGGCGGCC
GTCCAGCTGG CTGCCCGGCT CAAGCTGCCG GTGGTGGCCA CGCATCCCGT GCAGTTCCTC
ACCTACGACG ACTACGAGGC GCACGAGGCG CGGGTCTGCA TTGCCGAAGG TGAAATACTG
GGGAACACAC GCCGTGTGCG CAAGTTCACG CGCGAGCAAT ATTTCAAGTC GGCAGCGCAA
ATGACGCAGC TCTTTGCCGA TGTGCCGTCG GCGCTGGCCA ATACGCTGGA AATTGCCAGG
CGCTGCAACC TCAAGCTCGA GCTGGGCAAG CCCATGCTGC CTGATTACCC CACGCCGGAA
GTCGAGGGCG TGCGCATGCC CATCGATGCC TACTTTCGCC ATGCCTCGTT TGAAGGGCTG
GAAGAGCGCC TGGCGCACTT GTATCCCAAC GAAGCATTGC GGGACCAGAA ACGGCCGGTG
TATGTGGAGC GGCTGGAGTT CGAGATCAAC ACCATTCTGA AGATGGGTTT CCCGGGCTAC
TTCCTGATCG TGGGCGACTT CATCAACTGG GCCAAAAACA ATGGCTGCCC GGTGGGGCCG
GGGCGCGGTT CGGGTGCGGG CTCGCTGGTG GCGTATGCGC TGAGGATTAC CGACCTGGAC
CCGCTGCAAT ACAACCTGCT GTTCGAGCGC TTCCTGAACC CGGAGCGGGT CTCCATGCCC
GACTTTGATA TTGATTTTTG CCAAAGCAAT CGTGACCGCG TGATTGACTA TGTGAAAGAC
AAATACGGCC ATGATGCGGT CAGCCAGATC GTGACCTTTG GCACCATGGC GGCGCGCGCG
GCGATTCGCG ATGTGGGCCG TGTGCTTGAT TTTCCCTATG GTTTTTGCGA TGGAATTTCC
AAGCTGATTC CGAACAAGCC GGGGCAGGCC GTGACGCTGC AATTGCTCCC CGCCGAACGC
AAAAAAAATG ACAAGATGGT CTATGCGTTG GAAGCCGAAC CGGTTTTGGC CGAGCGCGAG
CGCAAGGAAG AAGACGTGCA CACGCTGCTG GACCTGGCCC GCAAGCTGGA AGGCCTGACG
CGCAACGTCG GCATGCACGC CGGGGGGGTG TTGATTGCGC CCGGCAAGCT GACTGACTTT
TGCCCGCTGT ATTTGCAGCC CGGCAGCGGC TCGGCGGTGA GCCAGTTTGA CAAAAACGAT
GTGGAGGCGA TTGGCCTCGT CAAGTTCGAC TTTTTGGGCC TGGCCACGCT GACCATTCTG
GAAATCGCCA GAGAGTTCAT CATTCAGCGC CACCCCTCGC AAAAAGATTT CAAATTTGAG
AACCTATCGC TCAACGATGC GCGGGTTTAT GCACTGTTTG CCGAGGGCAA TACCGAAGCC
GTTTTCCAGT TTGAAAGTAT CGGCATGCAG CGCATGCTCA AAGACGCCAA ACCGAACCGG
CTCGAAGACC TGATCGCGAT GAACGCGTTG TACCGCCCCG GCCCGATGGA CCTGATTCCG
ACCTACATTG CCCGCAAACA GGGCAAGGAA GTGCCCGAGT ACCCGGACCC CCGCGTCAAG
CCGATTCTGG AGGAGACCTA CGGCATCATG GTCTACCAGG AGCAGGTGAT GCAGACCGCG
CAGATATTGG GCGGTTACTC GCTGGGCGGT GCCGACATGC TGCGCCGCGC CATGGGTAAA
AAAGATGAGA AAGAGATGGC TTCGCAGCGG GATATCTTCC GCAAAGGTGC AGGCGTCAAT
GGCCTGACCC AGGAAAAAGC CGACGAAGTT TTTGACCTGA TGGAAAAGTT TGCGGGCTAC
GGCTTCAACA AGTCGCACTC GGCCGCTTAC GCCCTGCTGG CCTACCACAC GGCCTGGCTC
AAGGTGCACT ACACCGCCGA ATTCTTTGCG GCCAACATGA CCGTGGAGAT GGACGACACC
GACAAGCTCA AAATACTGTT TGGCGATGCG CAAAAAATGG GCATCCAGTT CGAGTCGCCC
GACATCAACC GCGGCGACTA CCGGTTTGAA CCCATCAGCG CTACCGCCGT GCGTTATGGC
CTGGGTGCCG TCAAGGGCAC CGGCCAGCAG GCGATTGCGG CCATCGTGGC GGCTCGACAG
GAAGGAGGGC CTTTCACCTC GCTCTACGAC TTCTGCGTGC GGGTCGACCG CAGCAAGCTG
AACAAGCGCA CGGTGGAGGC GCTCATCAAG GGCGGGGCGT TTGACAACCT GCATCTGAAC
CGTGCCGAGC TGCTGGCGTC GGTAGACCGT GCCTTCGAAT TTGCCGCCGC CACCGAGGCC
AATGCCAACC AGGGCGGGCT GTTTGACATG TCCGACTCGC ATGCCGCCAG CACGCAGGAG
CCGCCGCTGG TCGAGGCCGT GCCATTCGGT GTGAAGGCGC GTCTGGTACT TGAAAAAACC
GCCATCGGTT TTTACCTGTC AGGCCACTTG TTCGATGAGG TCGAGGCCGA AGTGCGGCAG
TTTGCCAAGC GCAAGATTGA AGACCTGATC GACTCCCGCG AGCCGCAGCT GCTGGCTGCC
ATCCTCAGTG ACTTGCGCGT GATCAACGGC AACCGGGGCA AGCTGATCAT ATTCAAGCTA
GACGACAAAA CCGATGTACT GGAAGCCTCG GTGGACGAGA CCGTCTTCAA CGCCAACCGC
AACCTGCTGA AAGACGACGA GCTGGTGATT GTGCAGGGCA CGCTGCAGGG CGCCTCCGAG
CGTTTCGGGC GGCGCTTCAA GGTCACGCAG GTGTGGGACC TTGAAACCGC GCGCTGCAAG
TTCGGCAAAT ATTTGCGCGT GGCGGTCAAT GGCGCAGCGC CCGATATTTC ACGGCTGGTC
CGCGACTTTC CACCGCGCCC CGAAATGACG GAGCAGGGGG AACTGAAGCG CGGTTTACCG
GTGCGCCTGA GCCTGCGCCG ACAAGACGGC AGGGTGGGCG CCACCGCCGA ACTTCATCTG
GGTGAAGCCG CCCGGTTCTT TCCGACCGAT GCCGCGCTGG CCAGCTGGAT GGCGCAGGCC
GACCGGGGGC TGGTGCAGAT TGTTTATGAG TGA
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| Protein sequence | MRVISKMRVG PSPKMKRMFV HLRIHTEFSV VDGTNRIDEI VQAAAADQQP ALAITDLSNL
FGTVKFYKEG RGAGVKPLIG ADVWVQVPGK DAAAPAARLL LLVQNHRGYL NLSELLTRAW
TRNVVRDQAV IKLEWLEELN EGLIALSGAQ GGAVGQALLQ GDDARALECA LHLAGLFPHR
FYLELQRAQR PDDERHVAAA VQLAARLKLP VVATHPVQFL TYDDYEAHEA RVCIAEGEIL
GNTRRVRKFT REQYFKSAAQ MTQLFADVPS ALANTLEIAR RCNLKLELGK PMLPDYPTPE
VEGVRMPIDA YFRHASFEGL EERLAHLYPN EALRDQKRPV YVERLEFEIN TILKMGFPGY
FLIVGDFINW AKNNGCPVGP GRGSGAGSLV AYALRITDLD PLQYNLLFER FLNPERVSMP
DFDIDFCQSN RDRVIDYVKD KYGHDAVSQI VTFGTMAARA AIRDVGRVLD FPYGFCDGIS
KLIPNKPGQA VTLQLLPAER KKNDKMVYAL EAEPVLAERE RKEEDVHTLL DLARKLEGLT
RNVGMHAGGV LIAPGKLTDF CPLYLQPGSG SAVSQFDKND VEAIGLVKFD FLGLATLTIL
EIAREFIIQR HPSQKDFKFE NLSLNDARVY ALFAEGNTEA VFQFESIGMQ RMLKDAKPNR
LEDLIAMNAL YRPGPMDLIP TYIARKQGKE VPEYPDPRVK PILEETYGIM VYQEQVMQTA
QILGGYSLGG ADMLRRAMGK KDEKEMASQR DIFRKGAGVN GLTQEKADEV FDLMEKFAGY
GFNKSHSAAY ALLAYHTAWL KVHYTAEFFA ANMTVEMDDT DKLKILFGDA QKMGIQFESP
DINRGDYRFE PISATAVRYG LGAVKGTGQQ AIAAIVAARQ EGGPFTSLYD FCVRVDRSKL
NKRTVEALIK GGAFDNLHLN RAELLASVDR AFEFAAATEA NANQGGLFDM SDSHAASTQE
PPLVEAVPFG VKARLVLEKT AIGFYLSGHL FDEVEAEVRQ FAKRKIEDLI DSREPQLLAA
ILSDLRVING NRGKLIIFKL DDKTDVLEAS VDETVFNANR NLLKDDELVI VQGTLQGASE
RFGRRFKVTQ VWDLETARCK FGKYLRVAVN GAAPDISRLV RDFPPRPEMT EQGELKRGLP
VRLSLRRQDG RVGATAELHL GEAARFFPTD AALASWMAQA DRGLVQIVYE
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