| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_2868 |
|---|
| Symbol | |
|---|
| ID | 4014481 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | + |
|---|
| Start bp | 3023567 |
|---|
| End bp | 3024076 |
|---|
| Gene Length | 510 bp |
|---|
| Protein Length | 169 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637942532 |
|---|
| Product | peptidyl-prolyl cis-trans isomerase, cyclophilin type |
|---|
| Protein accession | YP_549681 |
|---|
| Protein GI | 91788729 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.552255 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAACC CGAAAGTAGA ACTCCATATC AAGAACTACG GCGTCATCAC GCTGGAGCTC
GATGCCGCCA AGGCACCCAA GACCGTCGCC AACTTCCTGA GCTATGTCAA CAAGGGCCAC
TACACCAACA CCGTGTTTCA CCGCGTGATT CCCGGCTTCA TGGTGCAGGG TGGCGGCTTT
GAAGTCGGCA TGAAGCAAAA GCCTACCGAC GCCGAGATCG AGAACGAAGC CAGCAACGGC
CTGAAGAACG ACAACTACAC CGTCGCCATG GCCCGCACCA ACGCGCCCCA CTCGGCCAGC
TCGCAGTTTT TCATCAACGT GGCAGACAAC GGCTTTTTGA ACCACACTGC GCCCAGCGCA
TCAGGTTGGG GCTATGCCGT GTTTGGCAAA GTGGTGGCGG GCGCCGAGGT CGTTGACAAG
ATCAAGGCCG TCAAAACCGG CCGCAAGGGC TTTCATGATG ACGTGCCCCT CGAAGACGTG
GTGATCGAAA AAGCAGTGGC ACTGGCCTGA
|
|---|
| Protein sequence | MSNPKVELHI KNYGVITLEL DAAKAPKTVA NFLSYVNKGH YTNTVFHRVI PGFMVQGGGF
EVGMKQKPTD AEIENEASNG LKNDNYTVAM ARTNAPHSAS SQFFINVADN GFLNHTAPSA
SGWGYAVFGK VVAGAEVVDK IKAVKTGRKG FHDDVPLEDV VIEKAVALA
|
|---|
| |