| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_2862 |
|---|
| Symbol | |
|---|
| ID | 4014475 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | - |
|---|
| Start bp | 3017644 |
|---|
| End bp | 3018450 |
|---|
| Gene Length | 807 bp |
|---|
| Protein Length | 268 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637942526 |
|---|
| Product | phytanoyl-CoA dioxygenase |
|---|
| Protein accession | YP_549675 |
|---|
| Protein GI | 91788723 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG5285] Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAGCC TGTCCGACCA GGAAATCCGG CACTATCGGG ACCAGGGCTA CGTCATTCCG
CAGTTCCGGC TCAGCGATGC CTGGGTCCGC CGCATGCAGG ATGCGCTGAA CACCTTGATC
CGCAACAACC CGGGCGTGCG CCCCGAAAAA CTGGTGAGCG CCCATATCGA GGGCCACAAC
GATGAGGGCG TGCGGGGCAA CCGGGATTTT TTCGATCTCG CCATGAACCC GGATATCGTT
GACCTGGTCA CGCAGGTGAT CGGGCCCGAC GTCATCCTGT GGGGCTGCCA CGTATTCTGC
AAGCCGGCCA GCGAAGGTTT TGAAACGCCC TGGCACCAGG ACGGCCATTA CTGGCCCATC
CGCCCGCTGG CCAACTGCAC CGTCTGGGTG GCGCTGGAGC CGAGCACGCG CGAGAATGGC
TGCCTGCGCG TGATCCCCGG TTCGCACGCC GCCAAAGTGC TTCATCCTCA CCTGCATGAA
GACCGCACCG ATCTGACGCT GAACCAGCGC ATGGCCGAAG GCAGCTTTGA CGTGAACGAC
GCGGTGGATC TGGAACTTGA GCCCGGCCAG ATGTCTTTGC ACGACATCTA CATGATCCAT
GGCGCCCAGG CCAATACCTC CGGCATCCGG CGCACCGGCG TGGCGCTGCG CTATATGCCG
GGCACTTCAT TGTTCGACCG CAGCCTGCGC CCATCGGACG GCGAGACCGG CGTCCCGGTC
AGCTTTGCTA CGCGGCCTTT GTGGCTGCTC CGGGGCGAGG ACCGGACAGG GCGCAATGAT
TTCTCGGTGG GCCACCGTGG CTCGTAG
|
|---|
| Protein sequence | MASLSDQEIR HYRDQGYVIP QFRLSDAWVR RMQDALNTLI RNNPGVRPEK LVSAHIEGHN
DEGVRGNRDF FDLAMNPDIV DLVTQVIGPD VILWGCHVFC KPASEGFETP WHQDGHYWPI
RPLANCTVWV ALEPSTRENG CLRVIPGSHA AKVLHPHLHE DRTDLTLNQR MAEGSFDVND
AVDLELEPGQ MSLHDIYMIH GAQANTSGIR RTGVALRYMP GTSLFDRSLR PSDGETGVPV
SFATRPLWLL RGEDRTGRND FSVGHRGS
|
|---|
| |