Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_2848 |
Symbol | |
ID | 4014498 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | + |
Start bp | 3001533 |
End bp | 3002441 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637942511 |
Product | integrase catalytic subunit |
Protein accession | YP_549661 |
Protein GI | 91788709 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.419389 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.679584 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAGTACG CCTGGATTGC GAAACACAAG ACGAGCTGGC CGGTGACGGT GGCATGCGAG GCGCTCGGCG TGAGCGCCAG CGGCTACTTC GAGCACTGGC GGCGCAAGGA TGCGAGCAAG CCCAGCCGGC CGGGAGCGAA CAAGCGCATC AGCGACGAAG CCCTGCTGGT TCACATCAAG GCCATCCATG CCGAGGTCAA GCAGGAATAT GGCTGGCCCA AGGTGTGGAA GGAACTGCTG GCCCGGGGCG TTCGGGTGGG CAAGGAGCGT GTGCGCAAGC TGATGCAGCG CCACGGCATC AAGGCCAGGG GCAAGAGGAA ATTTGTCGTC ACCACCGACA GCAAACACGA CCTGCCCATT GCGCCGAACC TGCTGCAGCG CAACTTCGCG CCTGAGGCGC CGAACCAAGT GTGGAGCAGC GACATCACTT ACATCGCCAC CGATGAGGGC TGGCTGTACT TGACAGCAGT GATCGACCTG TTCAGCCGCC AAGTGGTGGG CTGGAGCATG AGGGAACACA TGCAGGCCAG CGTGGTGACG GATGCGTTGC GCATGGCGTG GTTTCGCCGC CGCCCTGCAC CGGGCCTGAT CTTTCATTCG GATCGGGGCA GCCAGTATTG CGGCCATGAG TTCCAGCAGG CCCTGCAGGG CTACGAGATG AAGTCCTCAA TGAGCCGCAA GGGTGACTGC TGGGACAACG CGCCCACCGA GAGCCTGTGG GGGCGCCTGA AGGTCGGCAG GCTATATGGC AGAAGGTTTG CCACACGGCG CCAGGCCATG GACGAGGTGA TGGACTGGAT CAATTTCTAC AACCACAAAA GATTGCACTC GACGCTGGGC TATGTCAGCC CGATGACGTT TGAGCAACGC TGGATCGCGG CCCAGCAGCA AGAAAGAAAG TCCGCATAA
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Protein sequence | MKYAWIAKHK TSWPVTVACE ALGVSASGYF EHWRRKDASK PSRPGANKRI SDEALLVHIK AIHAEVKQEY GWPKVWKELL ARGVRVGKER VRKLMQRHGI KARGKRKFVV TTDSKHDLPI APNLLQRNFA PEAPNQVWSS DITYIATDEG WLYLTAVIDL FSRQVVGWSM REHMQASVVT DALRMAWFRR RPAPGLIFHS DRGSQYCGHE FQQALQGYEM KSSMSRKGDC WDNAPTESLW GRLKVGRLYG RRFATRRQAM DEVMDWINFY NHKRLHSTLG YVSPMTFEQR WIAAQQQERK SA
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