| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_2840 |
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| Symbol | |
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| ID | 4014490 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 2993350 |
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| End bp | 2994627 |
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| Gene Length | 1278 bp |
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| Protein Length | 425 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637942503 |
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| Product | TRAP dicarboxylate transporter- DctM subunit |
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| Protein accession | YP_549653 |
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| Protein GI | 91788701 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.126693 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.318604 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCATTG CAATCTTTTT GACATCCCTG ATGGGAGCCA TGACGCTGGG CGTTCCCATT
GCCTTTTCCC TGCTGGTGTG CGGCGTCGCC CTGATGGTGC ACCTGAACAG TTTTGACACA
CAAATCCTGG CGCAAAACCT GCTCGAAGGC GCCAACAACT ACCCGTTGAT GGCTGTGCCG
TTCTTCATGC TCGCCGGCGA GCTGATGAAC GCTGGTGGCC TGTCCCGGCG AATCGTTGAT
GTAGCCAACG CGCTGGTCGG CCATGTTCGG GGCGGGCTGG GTTACACCGC CATCATTGCG
GCGGTCGTGA TGGCCAGTAT CTCTGGCTCT GCGGTCGCTG ATACGGCCGC TTTGGCCGCG
CTGCTGATAC CCATGATGCG CAAGGCGGGC TACAACGTGC CGCGTGCTGC AGGCCTCATT
GCCTCTGGCG GCATCATTGC GCCCATCATT CCGCCCTCGA TTGGCTTTGT GGTCTTTGGA
GTAGCCGCGC AGGTGTCCAT CACCAAACTT TTCATGGCGG GCATTGTTCC AGGTGTGATG
ATGGGCGTGG CCCTCGGGAT CACGTGGTGG TTTTTGGCCA AGAAGGAGCC GCTGGTCAAC
GGCGGCGAGT TCAGCCTGGC CAAAGTGGCC AGCGCCATCG TAAGTGGCAC CTGGGCGCTG
GCATTGCCCA TCGTCATCAT CGGCGGCATG AAATTTGGTG TGTTCACGCC AACCGAAGCG
GCCGTGGTTG CGGTGGTGTA TTCCCTCGGG GTTGGCCTGT TTGTCTATGG CGAGCTCAAA
CTGGCAGAGC TGCCCGAACT AATGCTAGCC GCCGCCAAGA CCTCCAGCAC CATCATGTTT
TTGGTGGCTA CCGCACTGGT CTCTGCCTGG CTCATCACCA TCGCCGACAT TCCAGCACAG
GCCGTTGCGT TGCTGCAGCC GTTCATGGAC AGCCCCAGGC TGCTCATGCT GGTGATGATG
CTGCTGGTCA TTGTGGTGGG CACCGCGCTG GACTTCATGC CCACCGTCTT GATCTTGACG
CCCATTTTGA TGCCGGTGGT CAGGCAAGCG GGTATTGACC CTGTCTATTT CGGCGTGATG
TTCATCATCA ACAACGCGAT TGGTTTGCTG ACACCCCCCG TGGGAACGGT ACTCAATGTG
GTGGCAGGCG TCGCCAGGGT CAACCTCGAC AAAGTCATCA AGAGCGTCTG GCCCTTCCTG
CTGGCGCAAA CGGTTTTGCT GTTTCTGTTC GTGTTGTTCC CGCAACTCAT CACGGGGCCG
GCGGCCTGGT TCCGCTGA
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| Protein sequence | MTIAIFLTSL MGAMTLGVPI AFSLLVCGVA LMVHLNSFDT QILAQNLLEG ANNYPLMAVP
FFMLAGELMN AGGLSRRIVD VANALVGHVR GGLGYTAIIA AVVMASISGS AVADTAALAA
LLIPMMRKAG YNVPRAAGLI ASGGIIAPII PPSIGFVVFG VAAQVSITKL FMAGIVPGVM
MGVALGITWW FLAKKEPLVN GGEFSLAKVA SAIVSGTWAL ALPIVIIGGM KFGVFTPTEA
AVVAVVYSLG VGLFVYGELK LAELPELMLA AAKTSSTIMF LVATALVSAW LITIADIPAQ
AVALLQPFMD SPRLLMLVMM LLVIVVGTAL DFMPTVLILT PILMPVVRQA GIDPVYFGVM
FIINNAIGLL TPPVGTVLNV VAGVARVNLD KVIKSVWPFL LAQTVLLFLF VLFPQLITGP
AAWFR
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