| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_2838 |
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| Symbol | |
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| ID | 4014488 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 2991826 |
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| End bp | 2992809 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637942501 |
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| Product | TRAP dicarboxylate transporter, DctP subunit |
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| Protein accession | YP_549651 |
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| Protein GI | 91788699 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0955544 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.310006 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACCC GTTCCTTTCT CAAACTCGCC CTGTCTGTGG CTGTGCTTGC ATCCACCCTG
AGCACCAACG CGCAAACCAC CAAAATCCGC TTTGCCCATG CCGGGCCGGA AACTGCGTCG
CAACACCTGG CAGCGCTGGA ATTTGCCAAG CTGGTCAAAG ACCGCAGCAA GGGGCAATTG
GAGATTCAGG TCTACCCGGG CAGCCAGTTG GGTAATGACT CGACCGTTTT AGGCGCTGTG
CGCGGCGGCA CCATCGACAT GATGATGGCA GGCAGCGGCA ACTTCTCGGG CATGGCCTCG
CATTTCGAGG TGCTCGACAT TCCATTTTTA TTTCGTAACC CGGCCCATGC CTATGCCACG
GTGGACGGTG TGGTCGGTCA GGGCCTGATG AAAGAGCTGG AAGGCAATGG ATTGAAGCAA
CTGGCATTTT GGGAAGTCGG CTTTCGCTCC ATCACGACCA AAACCCGCCC GGTCAAGACA
CCGGCCGATG TCAAGGGTTT GAAGATTCGC ACCATGCCTA ACCCGATTCA CCTGCAAGCC
TGGAAACTGC TCGGCACCAA CCCGGTTCCG ATGCCTTTGG GCGAGTTGTA CCAGGCGCTT
GAATCGGGTG CGGTGGATGC ACAGGAACAC CCGGTCGATA TCACCTACGC GGCCAAGTTT
TACGAAGTGC AAAAGCATCT CACCCTGACC CGGCACGCCT TTACCGCGAT GCCTGTTGTC
TTCAGCAAAA CCAAATTTGA CGCGCTCAGC CCGGACCTGC AAAAGGTGCT GCTGTCATCG
GCCGCCGATG CAAAGCTTTT CCAGCGCACC ATGAACCAGA AAAACGAGGC AGGAATCATT
GCCGATCTCC GCAAAAACGG CATGAACGTG ATCGAGACCT TTGACCCGAC CCCCTTCAAA
GCCGTGGTGG GCGAAGAAGT ACGAAAAACT TACACCGCCA AAAACGGGCC CGACCTGCTT
GTCGCAGTCG AAGCCGTCAA GTAA
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| Protein sequence | MKTRSFLKLA LSVAVLASTL STNAQTTKIR FAHAGPETAS QHLAALEFAK LVKDRSKGQL
EIQVYPGSQL GNDSTVLGAV RGGTIDMMMA GSGNFSGMAS HFEVLDIPFL FRNPAHAYAT
VDGVVGQGLM KELEGNGLKQ LAFWEVGFRS ITTKTRPVKT PADVKGLKIR TMPNPIHLQA
WKLLGTNPVP MPLGELYQAL ESGAVDAQEH PVDITYAAKF YEVQKHLTLT RHAFTAMPVV
FSKTKFDALS PDLQKVLLSS AADAKLFQRT MNQKNEAGII ADLRKNGMNV IETFDPTPFK
AVVGEEVRKT YTAKNGPDLL VAVEAVK
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