Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_2831 |
Symbol | |
ID | 4014520 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | + |
Start bp | 2983471 |
End bp | 2984616 |
Gene Length | 1146 bp |
Protein Length | 381 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637942494 |
Product | cystathionine gamma-lyase |
Protein accession | YP_549644 |
Protein GI | 91788692 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.10022 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0538673 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGCTTTT CCACCCAAGC CATTCACGCC GGCCAGCCGG CGGACCCGAC CACCGGCGCG ATCATGACGC CGGTGTACCT GAGTTCAACT TTCGTGCAGC AAGCGCCCGG CCAGCACAAG GGCTACGACT ACGGGCGCAC CGCCAATCCC ACACGCAGCG CGCTGGAGGC GAACATCGCG GCGCTGGAGG ACGGGACTTA CGGCCTGGCC TTCGCCAGCG GCCTGGCGGC GGAGTCCACC GTGCTGCAAT CGCTCAGCAG CGGCGACCAT GTGGTCTGCG GGCAGGACCT GTATGGCGGG ACCTACCGGC TGATGACCAA GGTCTTTGCG CGCTTCGGCA TCGAGGCCAG CTTCGTCGAC GCGACTTCGC CGGGCGCGAT CCGCGCCGCG CTGCGCCCGC AAACCCGGCT GGTCTGGCTG GAGACCCCGA GCAATCCGCT GCTGACCGTG TGCGACATCG CCGCCATCGC CCAGCTCGCG CACGAACACC AGGCCAGGCT CGCGGTCGAC AACACCTTCG CCTCGCCCTA CCTGCAGCAG CCGCTGCGCC TGGGCGCGGA CATCGTCATC CACAGCACCA CCAAGTACCT GGGCGGCCAC TCGGATGTGA TAGGCGGCGC CCTTGTGATG AATGACGAAG CGCTGTACCA GGAGCTCAAG TTCCTGCAAA ACGCGGTGGG CGCGGTGCCG GGTCCGCTGG ACTGCTTCCT CGTGCTGCGC GGCATCAAAA CCCTGGCCGT GCGCATGCGC CAGCATTGCG ACAACGCGCT GCAGCTGGCG CGCCACCTGG CCGCCCACCC CGAGGTCAAA CAGCTCGCCT ACCCCGGCCT GGAGTCCAGC CCCCATCACG CGCTCGCCAG CCGGCAGATG CGCGCCTACG GCGGCATGAT CTCGCTGGAA CTGCAAGGCG GCGTGGAGCG TAACATTCGG TTCACGACCC AGACGAAGCT GTTCGCGCTG GCCGAGAGCC TGGGCGGCGT CGAGTCCCTG ATCGGCCTGC CCACGGTGAT GACGCACGCC GCTATCCCGC CCGCGCAACG CCAGCAGGCC GGATTGCCCG ACGCGCTGGT GCGCCTGTCG GTCGGTCTCG AAGACATCGA GGACCTGATC GAAGACGTGG ACCGGGCGAT CGAAACATCG CGCTAA
|
Protein sequence | MRFSTQAIHA GQPADPTTGA IMTPVYLSST FVQQAPGQHK GYDYGRTANP TRSALEANIA ALEDGTYGLA FASGLAAEST VLQSLSSGDH VVCGQDLYGG TYRLMTKVFA RFGIEASFVD ATSPGAIRAA LRPQTRLVWL ETPSNPLLTV CDIAAIAQLA HEHQARLAVD NTFASPYLQQ PLRLGADIVI HSTTKYLGGH SDVIGGALVM NDEALYQELK FLQNAVGAVP GPLDCFLVLR GIKTLAVRMR QHCDNALQLA RHLAAHPEVK QLAYPGLESS PHHALASRQM RAYGGMISLE LQGGVERNIR FTTQTKLFAL AESLGGVESL IGLPTVMTHA AIPPAQRQQA GLPDALVRLS VGLEDIEDLI EDVDRAIETS R
|
| |