| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_2829 |
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| Symbol | |
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| ID | 4014518 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 2980777 |
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| End bp | 2982213 |
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| Gene Length | 1437 bp |
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| Protein Length | 478 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637942492 |
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| Product | RND efflux system, outer membrane lipoprotein, NodT |
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| Protein accession | YP_549642 |
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| Protein GI | 91788690 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.769411 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0596048 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTACAAGG AATTGAAATT TCGCCGCTAC CACTACGTGA TGGCCGCGGC ACTGGCCCTG
CTGGCCACAG GCTGCGCGGT CGGCCCGGAT TACAAGCGCC CGGCCACCGC CGATGTCAGC
GCCTTCAAGG AAGCCGAAGG CTGGGTGCCC GCCGCGCCGG CCGATGCGCT GGAGCGCGGC
CCGTGGTGGA CGCTGTTTGG CGACCCGGTG CTGGACCAGC TGCAGTCGCG GGTCGAGGTG
TCCAACCAGA ACGTGGCGCT GGCGGTGGCC GCCTATGCGC AGGCGCGTGC CCTGGTACGC
GAGCAGCGGG CATCGCTCTT TCCTTCGGTC ACGCTCGATG GTGGAGCCAG CCGTTCGAAG
AGCAGCGGCA GTGGCAGCAG CAGTTCTGGC GCTGGCGCTG GCGGGCGCAT TGGCAACAAC
TACCAGCTCA GCATAGGCGG CAGCTGGGAG CCCGACGTCT GGGGCCGGCT GGGCCGGGCC
GTCGACGGCG CCAGTGCCGG CGCCCAGGCG AGTGCGGCAG ACCTGGCCTC GGCCAAGCTG
TCGGCCCAGG GCGAACTCGC CGTCAATTAC CTTTCGCTGC GCCAGACCGA TGCGCAAAAG
GCCTTGCTGG AAAGCACGAT TGCCGGCTAC GAGCGTGCAC TGGAGATCAC GCAAAACCGC
TACGCGGCCA GCATTGCCGC CAAGACCGAT GTGCTGCAGG CGCAAACCCA ACTGGCCAAC
GCCAGGGCTG AAGCCGCAGG GCTGGTGCGC CAGCGCGCCC AGCTCGAGCA TGCCATCGCG
GTGCTGGTGG GCGAGGCGCC CGGTAATTTC ACGCTCGCAC CCGCCGCCTG GACACCCGTG
GTGCCAGAGA TTCCGGTCGG CGTGCCTTCC ACGCTGCTGC AGCGCCGGCC CGATATCGCG
GCAGCCGAGC GCCGCGTGGC CCAGGCCAAC GAGCAGATCG GCATCGCCAA AAGCGCCTAC
TTCCCCAGCC TGTCCTTGAG CGCATCGGCC GGCTCTGGCG CCAGCCGCCT CGCGGACCTG
TTCAAGGCCT CCAGCAGTGT CTGGTCGCTG GGCATTTCGG CCGCGCAGGT GCTGTTCAAT
GCTGGCGCGA CGGGGGCCCG CGTCGAAGGT GCGCAGGCCT CGCACGAGCA GGCAGTGGCG
CGCTACCGGC AGGCCGTGCT GACAGCATTC CAGGATGTCG AGGACCAGCT TTCCGCCACC
CGCGTGCTGC TGGTCCAGCA GGACTTGCGG CGCCAGGCCT CTGACGCCGC CGACCAGGTC
GAGCAACAGG TGTTCAACCG CTACCGCGGC GGTCAGGTCG GCTACACCGA GGTCATCACC
GCGCAGGCCA CCGCGCTGAG CGCGCGCCGC GCGCTGGTGC AGGCCATGGC CGACCGCCAA
ACCACCGCCG TGGCCTTGAT CCAGTCGCTG GGCGGCGGTT GGCAGGATGG ACGGTAA
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| Protein sequence | MYKELKFRRY HYVMAAALAL LATGCAVGPD YKRPATADVS AFKEAEGWVP AAPADALERG
PWWTLFGDPV LDQLQSRVEV SNQNVALAVA AYAQARALVR EQRASLFPSV TLDGGASRSK
SSGSGSSSSG AGAGGRIGNN YQLSIGGSWE PDVWGRLGRA VDGASAGAQA SAADLASAKL
SAQGELAVNY LSLRQTDAQK ALLESTIAGY ERALEITQNR YAASIAAKTD VLQAQTQLAN
ARAEAAGLVR QRAQLEHAIA VLVGEAPGNF TLAPAAWTPV VPEIPVGVPS TLLQRRPDIA
AAERRVAQAN EQIGIAKSAY FPSLSLSASA GSGASRLADL FKASSSVWSL GISAAQVLFN
AGATGARVEG AQASHEQAVA RYRQAVLTAF QDVEDQLSAT RVLLVQQDLR RQASDAADQV
EQQVFNRYRG GQVGYTEVIT AQATALSARR ALVQAMADRQ TTAVALIQSL GGGWQDGR
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