| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_2826 |
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| Symbol | |
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| ID | 4014515 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 2971888 |
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| End bp | 2973282 |
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| Gene Length | 1395 bp |
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| Protein Length | 464 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637942489 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_549639 |
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| Protein GI | 91788687 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.45041 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCCGA GAGCCGCAAC GCCGCACACC GGCGCCAATC CACCACCCGG TAAACGATTG
AGCCGCCGTG CATCCATCAT CGGCGCCGTG ATCGCCATCC TGGCACTGGC CGGTACCGGC
TGGCTGGCCT GGCACCTGAC ACATCCTTCG CCGGAAGCCG GCAGTACAGC GGCAGGACCT
GGTGGACCAG GAGCCCCTGC CGGACGGCGT GGCCCGCCAG CCACCACCGT GGGTGTGGCC
ACTGCCGAGC GGGCCAGCAT TCCAGTGATT CTGGAGGCGC TGGGTACCGT CACCCCGCAG
GCTACCGTCA AGGTGCGCCC CCAGGTGTCC GGTGTCATGG AAAAAGTACT GTTCAAGGAA
GGCCAGATGG TCAAGGCCGG CGATCTGCTG GCCACCATTG ACCCGCGCCA ATTTGAAATG
GCGCTGATGC AGGCTTCCGG CCAGCGCCAG CGTGACGAAG CGCAGCTCGA CAGCGCCCGC
GTCACCCTGC AGCGCTTCAA GACCCTGCTG GAGCAGGACT CGATTGCCCG CCAGGAAGTC
GACACCCAGG CCGCGCTGGT CAAGCAGCTG GAAGGCACGG TCGTCATTGA CAAGGCCTCC
GAGGGCACGG CCCGCCTTAA CCTGGGCTAC ACCCGGGTGG TAGCGCCAAT CAGTGGCCGG
GTGGGCCTGC GCACGGTGGA CGTCGGCAAT GTGGTGAGCA GCAGCGACGC CAATGGCATC
GCGCTGATCA CCCAGGTCAG CCCGATTGAC GTGGTGTTTT CCATTCCGCA GGACCAGGTC
GGCGAGCTGC AGCAAAGCGC CAGCGGCAGT GCGGCCATGA AGGTCACCGC GTTCGACCGG
ACGCGCTCCA CCACGCTGGA CACCGGTATG TTTGCCTCGC TGGACAACCA GGTCGACACG
CAGACCGGCA CGGTCAAGGC CAAGGCGCGC TTTGCCAACA GCAAGCTGGC GCTCTTCCCC
AGCCAGTTTG TCAATGTGCA GCTGCTGGTC AGGACCATTG ACAACGCTGT GGTGGTGCCG
GTGACGGCAC TGCGCCACGG CAGCACCGGC GACTATGTGT ATGTGGTCAA TACCGCCGAG
CGCACCGTGA GCCTGCGGCC CGTGCAGCGC GGCCAGGCCA CGGTCGACAA GATAGTGATC
GCATCCGGCC TGCAGCCCGG CGAGCGCGTC ATCACGGAAG GCGCCGACCG CCTGAAGGAC
GGCGCCAAGG TGATCTTGCC CGGTGACCAG CCCGGCGGCG GCGGCGCCGG ATCTACCGGC
AAGCGCCAGC GGCCCGGCGG GCCTGCTTCC GCGCCGGCAG CTGGGGCCTC CAGCCCGGCG
GCAGCCGATG CCCCCGCGGC CGATGCATCC AGCCCACGGC GGCGGCGCCG CGCTTCGCAA
GCTGAGGGCT CATGA
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| Protein sequence | MDPRAATPHT GANPPPGKRL SRRASIIGAV IAILALAGTG WLAWHLTHPS PEAGSTAAGP
GGPGAPAGRR GPPATTVGVA TAERASIPVI LEALGTVTPQ ATVKVRPQVS GVMEKVLFKE
GQMVKAGDLL ATIDPRQFEM ALMQASGQRQ RDEAQLDSAR VTLQRFKTLL EQDSIARQEV
DTQAALVKQL EGTVVIDKAS EGTARLNLGY TRVVAPISGR VGLRTVDVGN VVSSSDANGI
ALITQVSPID VVFSIPQDQV GELQQSASGS AAMKVTAFDR TRSTTLDTGM FASLDNQVDT
QTGTVKAKAR FANSKLALFP SQFVNVQLLV RTIDNAVVVP VTALRHGSTG DYVYVVNTAE
RTVSLRPVQR GQATVDKIVI ASGLQPGERV ITEGADRLKD GAKVILPGDQ PGGGGAGSTG
KRQRPGGPAS APAAGASSPA AADAPAADAS SPRRRRRASQ AEGS
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