| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_2809 |
|---|
| Symbol | |
|---|
| ID | 4014537 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | - |
|---|
| Start bp | 2953268 |
|---|
| End bp | 2953762 |
|---|
| Gene Length | 495 bp |
|---|
| Protein Length | 164 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637942473 |
|---|
| Product | AsnC family transcriptional regulator |
|---|
| Protein accession | YP_549623 |
|---|
| Protein GI | 91788671 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1522] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.3347 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGACAG AAACTGACGA ATACGATCAC TACGACAGCC GCATCCTGAC CGAACTGCAG
CGGGACGCCC GCATCACCAT GGCGGAGCTG GGACGACGCG TCCATTTGAG TCAGCCCGCG
GTGACTGAGC GCGTCCGCAA ACTGGAGCTG GGCGGTGTGA TCAGGGGCTA CCGCGCCGAG
GTCGACCTGG CGCGGTTGGG CTATGGGATT CGCGCCATCA TGCGCGTGGC ACGGGCCGAG
TACGCCCGGG TGGTCAAGCT GATTGAGCAG ACGCCGGAGG TGATCAACGC CTACAACGTC
ACCGGAGAAG ACAGCTGGGT GCTGGAAATT GCGGTCATTG ACGTTTCGCA TCTGGATGCA
GTCGTGACCA AATTCTGCAT CCTGACCGAG ACTTCTACCG CGATTGTGCT CAACGCCCCT
CGTGAGAACG CCATTGTGCT GCCTGCCCGC AGGGAAAACA TCAAACCCGC GATCAACAAG
GTCACGGGGA AATGA
|
|---|
| Protein sequence | MMTETDEYDH YDSRILTELQ RDARITMAEL GRRVHLSQPA VTERVRKLEL GGVIRGYRAE
VDLARLGYGI RAIMRVARAE YARVVKLIEQ TPEVINAYNV TGEDSWVLEI AVIDVSHLDA
VVTKFCILTE TSTAIVLNAP RENAIVLPAR RENIKPAINK VTGK
|
|---|
| |