| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_2772 |
|---|
| Symbol | |
|---|
| ID | 4014576 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | - |
|---|
| Start bp | 2914103 |
|---|
| End bp | 2914972 |
|---|
| Gene Length | 870 bp |
|---|
| Protein Length | 289 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637942436 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_549586 |
|---|
| Protein GI | 91788634 |
|---|
| COG category | [H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.132653 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGATTC CTGGCGTGGG GGATGCTCCC GGGCTGGAGC TGCAAGGCGT GTCGCTGCAG
CGGGATGGCC GTATGGTTCT GGATGCACTG GATCTGCAGG TTCCCTTCGG CGAGCACCTG
GCATTGATCG GACCCAACGG CTCCGGCAAG TCGAGCCTTT TGCATGTCAT GGCCGGCCGC
ATCAGCCCGC CAGCAGGGCG TGTCATGTTG GGCGGGGCCG CTTTGTCGCA GCTGCCCGCC
GCGCAGCGTG CACAACACAT TGCGGTTGTT CAGCAAAAAG AACACATCCA CGCACTGCTT
TCGGTGAGCA AGTACGTTGC GCTGGGACGC ACGCCATTTG CCTCGGCCAA ACGTGAAGAG
AACGCATCGC AGGTGCAACA TGCGTTGGAA CGTTGCGGCC TGTGGAATCT TCGCCACCGG
CGCGTCGGTG CGCTGTCCGG GGGAGAGCAG CAGCGGGCAT GTATCGCACG CGCGCTGACA
CAGCAGCCCA AGGTATTGCT GTTGGATGAG CCGACCAACC ACCTTGACAT GCGCGCGCGC
GCCGACATTC TGGACATGGT GGCAGACATC GGTGTCACCG TGATTGCAGC CTTGCACGAG
CTGAGTCTGG TGCACCGGTT CGCTGATCGA GTGTTGATGC TGCAGCAAGG GCGTGTGGTT
GCCCTGGATG TACCTCCGCG CGCGCTCTGC CAGTCACATG TCAGCCGTAC GTTTGCCATG
GACGTGCATT ACGTCCCTAT TCCCGGGCGG GTGTCGCCCG TGGCAGTTTT TGAGTCACCC
CGGCTTGCGC CCGCAAAGCG CATTCCCCCC ACCTCTCAAG CACTATCCCT GGAGGGATCT
CCCCATGCTG AATTCTGTCC CGCTTTTTAA
|
|---|
| Protein sequence | MMIPGVGDAP GLELQGVSLQ RDGRMVLDAL DLQVPFGEHL ALIGPNGSGK SSLLHVMAGR
ISPPAGRVML GGAALSQLPA AQRAQHIAVV QQKEHIHALL SVSKYVALGR TPFASAKREE
NASQVQHALE RCGLWNLRHR RVGALSGGEQ QRACIARALT QQPKVLLLDE PTNHLDMRAR
ADILDMVADI GVTVIAALHE LSLVHRFADR VLMLQQGRVV ALDVPPRALC QSHVSRTFAM
DVHYVPIPGR VSPVAVFESP RLAPAKRIPP TSQALSLEGS PHAEFCPAF
|
|---|
| |