Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_2721 |
Symbol | |
ID | 4014603 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | + |
Start bp | 2867619 |
End bp | 2869466 |
Gene Length | 1848 bp |
Protein Length | 615 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637942385 |
Product | ABC transporter related |
Protein accession | YP_549535 |
Protein GI | 91788583 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.244444 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCTTAT TCAGGAAATT CGAAAGGCTG CTGCACGCCT ACCCGGAGGC CGAGCCAGCC GTACTGCCCA AGGGCTTCGT CGCCTTCATC TGGGCGTGCA GCCGCGGCGC CCGCGGCTAT ATCCTGATGC TGGCGCTGCT GGCTGCCGCG ATATCGGCCT TTGAAGCGCT GATGTTTGCC ATGCTGGGCC GCATCGTGGA CTGGCTGGGC AAGGCCGAGC CGGCGCGCTT GTGGACTGAT CATGGCGCCA CCCTCACGGT GCTGGCGTGG ATAGTGCTGG GCAGCGTTGT CGTGGTCGCG CTGCAGACCA TCGTCAAGCA CCAGACGGTG GCCATCAACT TCCCGATGCG CCTGCGCTGG AACTTCCACC GTCTGATGCT GGGCCAGAGC ATGGCCTTTT ACCAGGACGA ATTTGCCGGC CGCCTGACCA CCAAGGTGAT GCAGACCGCA CTGGCTGTGC GCGACACGCT GTTTGTGCTG GCCGATGTGC TGGTGGCCAT GGTGGTCTAT GTGGCGACCA TGACCGTACT GGCCGCCGCC TTCGACACCC GGCTGATGGC CCCCTTCCTG GCCTGGCTGA CGCTGTACAT CGCGTCGCTC TGCTTCTTTG TACCGCGGCT GGGCCATATC GGCAAGCAGC AGGCCGATGC GCGCTCGCTG ATGACCGGCC GCATCACCGA CGCTTACACC AACATCACCA CCGTCAAGCT GTTCTCGCAT ACCCAACGCG AAGCCGCCTT TGCCCGCTCC GCCATGCAGG AGTTCATGAA AACCGGCTAC ACCCAGATGC GGCTGGTGAG CGCGTTTGAA ATCGTCAACC ACGCCTTGAG CATGGGCCTG ATCCTGGGCA TGGCGGGCAC CTCGCTGTGG CTCTGGAGCC TGGGCCAGGT GGGCGCCGGC GCCGTCGCGG CGGCCACGGC CATGGCCCTG CGCCTGCAGG GCATGTCGCA CTGGATCATG TGGGAGATGA CCAGCCTGTT TGAAAGCGTG GGCACGGTGC AGGATGGCAT CAACACCCTG TCACGGCCGC GCGCGATTGT CGACAAGCCA GATGCCGCCG TGCTCGAGGT GCCGCGTGGC GAGATCCGCT TCGAGCAGCT TGGTTTCAGC TATGGCGAGG GGCCGCGCGT CATCGACGGG CTCGCGCTGA CTATCAAGCC TGGTGAAAAA ATCGGCCTCA TCGGCCGCTC CGGTGCCGGC AAATCCACGC TGGTCAACCT GCTGCTGCGA TTTCATGACC TCAACGCCGG CCGCATGCTG ATCGACGGGC AGGACATTGC CGGCGTGACG CAGGACAGCC TGCGCAGCCA CATCGGCATG GTCACGCAGG ACACCTCGCT GCTGCACCGC TCGGTGCGGG ACAACATCAC CTACAGCCGC CCCGGCGCGA CCGAAGCGCA GATGCAGACC GCCGCACGGC GCGCGGAAGC CGACGGTTTC ATTGCCAACC TGACAGACCC GCATGGCCGC AAGGGCTACG ACGCGCACGT GGGTGAGCGC GGCGTCAAGC TCTCGGGCGG GCAGCGCCAG CGCATCGCGA TTGCCCGCGT CATGCTCAAG GACGCCCCTA TCCTGCTGCT GGATGAGGCC ACCAGCGCAC TCGACTCTGA AGTGGAACTC GCCATCCAGG GCAGCCTGAA CACCCTGATG CAGGGCAAAA CGGTGATTGC GATTGCGCAC CGCCTCTCGA CCATTGCCGC CATGGACCGG CTGATTGTGC TGGACCAGGG CCGCATCGTG GAAGAAGGCA GCCACCGCAC GCTGCTGGCG AGTGGCGGCC TGTATGCGCG GCTGTGGGCT CACCAGAGCG GCGGCTTTCT GACGGATGAA CTCGAACTTG CGGCGTAG
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Protein sequence | MPLFRKFERL LHAYPEAEPA VLPKGFVAFI WACSRGARGY ILMLALLAAA ISAFEALMFA MLGRIVDWLG KAEPARLWTD HGATLTVLAW IVLGSVVVVA LQTIVKHQTV AINFPMRLRW NFHRLMLGQS MAFYQDEFAG RLTTKVMQTA LAVRDTLFVL ADVLVAMVVY VATMTVLAAA FDTRLMAPFL AWLTLYIASL CFFVPRLGHI GKQQADARSL MTGRITDAYT NITTVKLFSH TQREAAFARS AMQEFMKTGY TQMRLVSAFE IVNHALSMGL ILGMAGTSLW LWSLGQVGAG AVAAATAMAL RLQGMSHWIM WEMTSLFESV GTVQDGINTL SRPRAIVDKP DAAVLEVPRG EIRFEQLGFS YGEGPRVIDG LALTIKPGEK IGLIGRSGAG KSTLVNLLLR FHDLNAGRML IDGQDIAGVT QDSLRSHIGM VTQDTSLLHR SVRDNITYSR PGATEAQMQT AARRAEADGF IANLTDPHGR KGYDAHVGER GVKLSGGQRQ RIAIARVMLK DAPILLLDEA TSALDSEVEL AIQGSLNTLM QGKTVIAIAH RLSTIAAMDR LIVLDQGRIV EEGSHRTLLA SGGLYARLWA HQSGGFLTDE LELAA
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