Gene Bpro_2716 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_2716 
Symbol 
ID4014636 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp2861383 
End bp2862105 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content63% 
IMG OID637942380 
Product2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 
Protein accessionYP_549530 
Protein GI91788578 
COG category[I] Lipid transport and metabolism 
COG ID[COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase 
TIGRFAM ID[TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.724423 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0573301 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGCAA CCAGCGCAAA TTCCCTCAAT TCGTCCATTT CCCGTTTTTT TGCCCTGATT 
CCCTGTGCGG GGCAGGGCAG CCGCGCCGGA ACGCCCGGCG CCAAGCAATA CCAGGTGATT
GCCGGCAGGG CCATGGTGTT GCATACGCTG GCGGCTTTTT CAGATGTTGA ACGTCTTTCA
GGCATGCTGG TGGTGGTGGC GCCCGGTGAC CCGTTTTTTG ATCAGGCCTT GAACAAGCGT
TTCGATGTGG CCGCTTGCGG CGGCGCCAGC CGCGCCGCGA GTGTGCGCAA CGGCCTGCAG
GCACTGGTCA ACAGTGGCGC CGAGGAGCAC GACTGGGTGT TGGTCCACGA TGCGGCCCGC
TGCCTGATTA CCCCTGCGCA AATCAACCAG CTGATCGATG CCTGCGAACA CGACGAGGTG
GGTGGTTTGC TTGCGCACAA GCTGCCCGAC ACCCTCAAGG TGGAAGTGGG CGGGCGTGTG
GCGGCCACCA TTGACCGGAA CGATAAGTGG CTGGCCCAGA CGCCGCAGAT GTTTCGCATT
GGTGCGCTGA GCCGGGCACT CGACCTGGCC GGCCCCGCCG TGACCGACGA AGCCAGTGCC
ATGGAGGCCT TGGGCCTGGC GCCGAAATTG GTGGCTGGCA GTGCGCAAAA TTTCAAGGTG
ACCTACCCCG AAGACTTTGC ACTGGCTGAG GCGATTCTGC TCACGCGCAG CCGCAGACCC
TGA
 
Protein sequence
MTATSANSLN SSISRFFALI PCAGQGSRAG TPGAKQYQVI AGRAMVLHTL AAFSDVERLS 
GMLVVVAPGD PFFDQALNKR FDVAACGGAS RAASVRNGLQ ALVNSGAEEH DWVLVHDAAR
CLITPAQINQ LIDACEHDEV GGLLAHKLPD TLKVEVGGRV AATIDRNDKW LAQTPQMFRI
GALSRALDLA GPAVTDEASA MEALGLAPKL VAGSAQNFKV TYPEDFALAE AILLTRSRRP