Gene Bpro_2705 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_2705 
Symbol 
ID4014625 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp2850896 
End bp2851678 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content62% 
IMG OID637942369 
Product3-hydroxybutyrate dehydrogenase 
Protein accessionYP_549519 
Protein GI91788567 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID[TIGR01963] 3-hydroxybutyrate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0392543 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0560385 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCAAAG GTAAAACAGC TCTCGTTACC GGCTCCACCA GCGGCATCGG CCTGGGCATT 
GCCAAATCCC TCGCCGCACA GGGCGCCAAC ATCGTCCTCA ATGGGTTTGG CGATGTGGAC
GGGCCCAAGG CGGAGATCCT GGCGCTCGGC GTCAAGGTGG CCTACCACGG TGCCGACATG
AGCAAGCCCG CAGACATTGA AGACATGATG AAATTCGCCG CCTCGCAGTT CGGGCAGGTC
GACATTCTCG TCAACAACGC GGGCATCCAG CATGTGGCCC GGGTAGAAAA CTTCCCGGTT
GAAAAATGGG ATGCGGTCAT CGCGATCAAC CTGACCAGCG CCTTTCATGC CACACGCCTG
GCGCTGCCCG CCATGCTGGC CGCGGACAAT GGCAAGGGCT GGGGCCGCAT CATCAATATC
GCCTCGGTGC ATGGCCTCGT CGGCTCCGCG GAAAAATCAG CCTATGTGGC GGCCAAGCAC
GGCATTGTCG GACTGACCAA GGTCACCGCG CTTGAGAACG CCACCAGCGG CGTGACCTGC
AACGCCATCT GCCCCGGTTG GGTGCTGACA CCCCTGGTAC AAAAACAGGT GGATGCCAGG
GCTGCGGCGG GAAATATTTC CATCGAGGCA GCCACCCAGC AGCTGCTGGG TGAAAAAGAA
CCTTCGATGC GATTCACCAC GCCCGAAGAA CTGGGCGCGC TGGCGGTGTT CTTCTGCTCT
GCGGCGGGCA ACAATGTACG CGGCGTCGCG TGGAACATGG ACGGCGGCTG GACGGCGCAG
TAA
 
Protein sequence
MLKGKTALVT GSTSGIGLGI AKSLAAQGAN IVLNGFGDVD GPKAEILALG VKVAYHGADM 
SKPADIEDMM KFAASQFGQV DILVNNAGIQ HVARVENFPV EKWDAVIAIN LTSAFHATRL
ALPAMLAADN GKGWGRIINI ASVHGLVGSA EKSAYVAAKH GIVGLTKVTA LENATSGVTC
NAICPGWVLT PLVQKQVDAR AAAGNISIEA ATQQLLGEKE PSMRFTTPEE LGALAVFFCS
AAGNNVRGVA WNMDGGWTAQ