Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_2705 |
Symbol | |
ID | 4014625 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | + |
Start bp | 2850896 |
End bp | 2851678 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637942369 |
Product | 3-hydroxybutyrate dehydrogenase |
Protein accession | YP_549519 |
Protein GI | 91788567 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | [TIGR01963] 3-hydroxybutyrate dehydrogenase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0392543 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0560385 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTCAAAG GTAAAACAGC TCTCGTTACC GGCTCCACCA GCGGCATCGG CCTGGGCATT GCCAAATCCC TCGCCGCACA GGGCGCCAAC ATCGTCCTCA ATGGGTTTGG CGATGTGGAC GGGCCCAAGG CGGAGATCCT GGCGCTCGGC GTCAAGGTGG CCTACCACGG TGCCGACATG AGCAAGCCCG CAGACATTGA AGACATGATG AAATTCGCCG CCTCGCAGTT CGGGCAGGTC GACATTCTCG TCAACAACGC GGGCATCCAG CATGTGGCCC GGGTAGAAAA CTTCCCGGTT GAAAAATGGG ATGCGGTCAT CGCGATCAAC CTGACCAGCG CCTTTCATGC CACACGCCTG GCGCTGCCCG CCATGCTGGC CGCGGACAAT GGCAAGGGCT GGGGCCGCAT CATCAATATC GCCTCGGTGC ATGGCCTCGT CGGCTCCGCG GAAAAATCAG CCTATGTGGC GGCCAAGCAC GGCATTGTCG GACTGACCAA GGTCACCGCG CTTGAGAACG CCACCAGCGG CGTGACCTGC AACGCCATCT GCCCCGGTTG GGTGCTGACA CCCCTGGTAC AAAAACAGGT GGATGCCAGG GCTGCGGCGG GAAATATTTC CATCGAGGCA GCCACCCAGC AGCTGCTGGG TGAAAAAGAA CCTTCGATGC GATTCACCAC GCCCGAAGAA CTGGGCGCGC TGGCGGTGTT CTTCTGCTCT GCGGCGGGCA ACAATGTACG CGGCGTCGCG TGGAACATGG ACGGCGGCTG GACGGCGCAG TAA
|
Protein sequence | MLKGKTALVT GSTSGIGLGI AKSLAAQGAN IVLNGFGDVD GPKAEILALG VKVAYHGADM SKPADIEDMM KFAASQFGQV DILVNNAGIQ HVARVENFPV EKWDAVIAIN LTSAFHATRL ALPAMLAADN GKGWGRIINI ASVHGLVGSA EKSAYVAAKH GIVGLTKVTA LENATSGVTC NAICPGWVLT PLVQKQVDAR AAAGNISIEA ATQQLLGEKE PSMRFTTPEE LGALAVFFCS AAGNNVRGVA WNMDGGWTAQ
|
| |