| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_2687 |
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| Symbol | |
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| ID | 4014642 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 2827038 |
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| End bp | 2829392 |
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| Gene Length | 2355 bp |
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| Protein Length | 784 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637942349 |
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| Product | surface antigen (D15) |
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| Protein accession | YP_549501 |
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| Protein GI | 91788549 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4775] Outer membrane protein/protective antigen OMA87 |
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| TIGRFAM ID | [TIGR03303] outer membrane protein assembly complex, YaeT protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.379638 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCTCAC CCGGCTATTG GGCTAACACC AGGACTCAGG CCAATTTCAT ACATTTCATG
CAAAAACAAT TAAATAAATT CAAAATTCGT GCGGTCTGCG CCATTGCCGC TGGTTTGTTT
GCTGTCAATG CCGCCTGGGC AGTTGATCCC TTCACCGTCC GTGACATCCG GGTTGAAGGC
TTGCAGCGCG TTGAGCCCGG GACGATTTTT GCCTCGCTTC CCTTTCGTGT CGGCGAAACC
TATAACGACG AGAAGGGCTC CACGGCCATT CGAGCGCTGT TCGGCCTCGG CCTGTTCAAG
GATGTCCGGC TCGAAGTCAG CGGTGACGTG CTGGTCGTCA TTGTTGAAGA GCGTCCTACC
GTAGCGGACG TTGACTTCGT CGGTACCAAG GAATTTGACA AGGAAGCCCT TAAAAAGGCG
CTTCGCGACG TTGGCATTGC CGATGGCCAG CCTTTCGACA AGGCCCTGGC GGACAAGGCA
GAGCAGGAAC TCAAGCGCCA GTACATCAAC AAGAGCCTGT ATGGCGCGGA GGTGGTCACC
ACGGTGACGC CGATCGAGCG CAACCGCGTG AACCTGACTT TCAGCGTCGT TGAAGGCGAC
GTGGCAAAAA TCAAGGAAAT CCACATTACC GGCAACAAGG CGTTCAGCGA GTCCACCCTG
CTGGGCCTGT TTGACCTTGA CACCGGCGGA TGGCTCAGCT GGTACACCAA GTCTGACCGT
TATTCCCGGG CCAAGCTCAA TGCCGATATT GAGACCCTGC GTTCCTACTA TCTGTCCCGT
GGTTACCTTG AGTTCAAGGT CGATTCAACC CAGGTCGCGA TCTCTCCCGA CAAGCAAAGC
ATCGCTGTCA CCGTCAACGT CACCGAGGGC GAACGCTTCG TGGTCTCCAG CGTGAAGCTT
GAGGGCGATT ACCTGGGCAA GGAAGAAGAA TTCAAATCCC TGGTGACCAT CAAGCCTGCC
GAGGCGTACA ACGCCGACGC AGTGGCCGAG ACCAGGAAGG CTTTTATCGA CTACTTCGGC
ACCTTCGGAT TCGCTTTCGC CAGGGTCGAA GCTGTGCCTG AAATTGACCG GGTCAATAAC
CGTGTGGCCT TTGTGCTGCA GGCGGAGCCA TCCCGCCGGG CCTATGTGCG GCGCGTGAAT
GTGTCGGGCA ACAACCGCAC GCGCGATGAA GTGGTGCGCA GGGAGTTTCG CCAGTTCGAG
TCCTCCTGGT ATGACGGCGA CAAGATCCGC CTGTCGCGTG ATCGCGTTGA CCGCCTGGGC
TTTTTCAATG AGGTGAATAT CGATACCCAG GAAGTGACGG GTACGGCCGA CCAGGTTGAT
GTCAATGTTT CCGTGGTTGA AAAACCCACC GGCAACCTGC AGCTTGGCGC GGGCTATTCA
AGTGCCGACA GCGTTTCCCT GCTGTTCGGC ATCAAGCAGG AAAACGTTTT TGGTTCGGGC
AACTACTTGG GTATTGAAGT CAATACCAGC AAGTCAAATC GCCAGATGGT CCTGAGCACG
ATCGACCCGT ATTTCACGGC CGATGGCATC TCCCGCACCA TTGACGTGTA CGACCGCACG
TCCAAGCCGC TGTCCGGCCA GGGCGGTGAC TACAGCCTGA AGACGAGGGG CGCAAGCATT
CGTTTCGGCG TTCCCTTCAC CGAGAACGAC ACGGTTTATT TTGGCAGTGG TTTCGAGTCC
CTGACGATCG TGCCGGGAAC CAACCTTCCC GTGAGCTACC AGACCTATGC CGATCAGTTC
GGCTTCAAGA GCAACTCCAT TCCCCTGACG GTCGGCTGGT CGCGTGACAA CCGGGACAGC
GCACTGGTGC CCACTTCGGG CCGGTACCAG CGTTTGTATG GGGATTGGGG TGTTGCGGGC
GACATCAAGT TTGTGCGCGC CAATTACCAG GTCCAGCAAT ACATTCCGCT GAACAAGCAG
TTCACGGTTG CGCTGAATGG CGAGTTGGGC TGGGGCAAAG GCCTCAGCGG ACAGCCTTAC
CCGCTTTTCA AGAACTACTA CTCGGGTGGC TTGGGATCGG TGCGCGGGTT TGAGCAGAGC
TCCCTGGGTC CCCGTGATGC CTCGGATCTG GCGACGGGTG GTCCGAAAAA ACTGACGCTC
AATGCCGAGC TCATCGCGCC ATTCCCGGGC GCCGGAAACG ACCGTACGCT GCGTATGTAC
GGATTTGTCG ATGCAGGCAA CGTATTCGGC GAAAAGGAGA GCTATCGCGT CAATGACCTG
AGGGCTTCCG CCGGTATCGG CATCAGCTGG ATTTCTCCGG TGGGCCCCCT GCGAATTGCC
TATGCCATGC CAATACGCAA AATGGCAGGC GATAGAATAG AACGGTTGCA ATTCCAAATT
GGTACATCTT TCTAA
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| Protein sequence | MISPGYWANT RTQANFIHFM QKQLNKFKIR AVCAIAAGLF AVNAAWAVDP FTVRDIRVEG
LQRVEPGTIF ASLPFRVGET YNDEKGSTAI RALFGLGLFK DVRLEVSGDV LVVIVEERPT
VADVDFVGTK EFDKEALKKA LRDVGIADGQ PFDKALADKA EQELKRQYIN KSLYGAEVVT
TVTPIERNRV NLTFSVVEGD VAKIKEIHIT GNKAFSESTL LGLFDLDTGG WLSWYTKSDR
YSRAKLNADI ETLRSYYLSR GYLEFKVDST QVAISPDKQS IAVTVNVTEG ERFVVSSVKL
EGDYLGKEEE FKSLVTIKPA EAYNADAVAE TRKAFIDYFG TFGFAFARVE AVPEIDRVNN
RVAFVLQAEP SRRAYVRRVN VSGNNRTRDE VVRREFRQFE SSWYDGDKIR LSRDRVDRLG
FFNEVNIDTQ EVTGTADQVD VNVSVVEKPT GNLQLGAGYS SADSVSLLFG IKQENVFGSG
NYLGIEVNTS KSNRQMVLST IDPYFTADGI SRTIDVYDRT SKPLSGQGGD YSLKTRGASI
RFGVPFTEND TVYFGSGFES LTIVPGTNLP VSYQTYADQF GFKSNSIPLT VGWSRDNRDS
ALVPTSGRYQ RLYGDWGVAG DIKFVRANYQ VQQYIPLNKQ FTVALNGELG WGKGLSGQPY
PLFKNYYSGG LGSVRGFEQS SLGPRDASDL ATGGPKKLTL NAELIAPFPG AGNDRTLRMY
GFVDAGNVFG EKESYRVNDL RASAGIGISW ISPVGPLRIA YAMPIRKMAG DRIERLQFQI
GTSF
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