| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_2673 |
|---|
| Symbol | |
|---|
| ID | 4014666 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | + |
|---|
| Start bp | 2811571 |
|---|
| End bp | 2814192 |
|---|
| Gene Length | 2622 bp |
|---|
| Protein Length | 873 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637942335 |
|---|
| Product | multi-sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_549487 |
|---|
| Protein GI | 91788535 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2202] FOG: PAS/PAC domain
[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0861202 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCATGC GGGTATCGCC GGGATACATC TCACTTAAAC TGTTACCTTC CTCTATGTCC
AAGCCCTCCT CCTTTTCCGA CTCCGTTGCA GCGAGTCCCG CACCCCTCGC TTTCTGGCAC
CGCTGGTGGG GCAAACAGTC GCCATCGCGG CAGGACCGTT TTATCACCTT GGGTCCGCTG
CTGGCGGTGG TGCTGTTCCT GGCGGCTGTC ATCGCGGCCT TCGCCTATCT GCGGATCGAG
GAAATAGACC GCGAGCAGCA GGCCGTCAAA CGCGATGTCG AATACGCCCA GCAAAGGTTG
CGCCTGCGGC TGCTTGAGAG GCAGGAGCAG CTCATGCGCA TTGGCCGGGA TGTGTCCAAC
AAGGAGGTTG ACGCCGAAGA GTTCATCGTC CAGGCCGAAT CGCTGGTCAA CCAGTACCCC
GAACTGATGA CTGTGACGTG GATCGACAGC AAGCGGCGCG TCAAGGTTGC CTATGCATCG
CCCAGCGTCC ATCCCAGCCA GTCGCGCGTC GCAGGCGAGC AGCTCAAGGT CGGCGAGACA
GACGGCACGT ATGAACTGGC GCGAGACCTG CGCCAGCCGG TTTACTCACG CCCCCTGGCA
GCCAACGAAC ATAGCGGCCA CAACGCACCT ACCCTGCAAT TGCAGGTGCC ACTCGATGAC
CAGGGGAAAT TTGACGGCGT CATCATGGGC GAATACTCCA TCGATGGCTT GCTGCGCTTC
GGCGTTCCCA CCGAAGTGAC CGCCAAATAC GCGGTGACCC TGATCAATGA CAAGAACCTC
GTGCTGGCTG GCAACTTGCC ACCCAGGCGC AATCCGGCGG CCCGGCTGCT GCCGTGGTCT
GACGCTGCTG CCGAGTACGA GATCCCGGTT TCACCTGTGG GCAACGGGCT GCTGATTCGC
GCAGAAGGCT ACCGTGCCTC GCTGGGCGTT GTGGGCAGCG GCTTCTTCTG GCTGGTCAGC
GCCCTCAGCG CCCTGACCGT CTGGATGCTT CTGGGCACCT GGCGCCACAC CCGCCGCCGC
GTCCAGGCGC AGCAGGCGCT GATATCCGAA ACCAACTTCC GCCGAGCGAT GGAAAATTCC
ATGCTCACCG GCATGCGCGC GCTGGATTTG CAGGGCCGCA TTACCTACGT CAACCCCGCT
TTCTGCGCAA TGACGGGCTT TAGCGAAAGC GAGCTGGTGG GCCGTACCCC GCCCTTCCCG
CACTGGCCTG AAGCCGAGAT CGATATCCTG ATGGCGCGGC TTGACGACGA GTTGCACGGC
CGCACCCCTC CCGGTGGATT CGAAGTCCGT GTCAAACGCA AAAACGGCCA AATCTTTGAT
TCCCGCATGT ATGTGTCGCC CCTGATTGAC CCACGCGGGC AACAGACGGG CTGGATGACG
TCGATGACGG ACATCACCGA GCCCAAGCGC ATTCGCGAAG AACTGTCAGC CTCGTATGAA
CGCTTCACCA CGGTGCTGGA GGGGCTGGAT GCAGCGGTCT CCGTAGCGCC GCTGGGCAGC
GAAGAACTGC TGTTTGCCAA CAAGCTGTAC CGGTCCTGGT TCGGCGGCGA GGTGTCCGGG
CACATGAACC TGATTGCGCA GGCCGGTGTG CCGGCTGCCA TGCCCACCGA AGACGCCATC
GATCCGGTGG ACGGCATGGC CGGATTTCCG ACCGACACCC TGACCACCGC CCAGACGGAA
AACGCCGAAA TATTTGTGCC CGACCTGGGC AAGTGGCTGG AAGTGCGCTC GCGCTACCTC
ACTTGGGTAG ACGGCCGCCT GGCGCAAATG GTGATCGCGA CCGACATCAC GCCACGGCGC
CATGCCGAAG AACAGGCCGC GCAGCAAAAC GAGCGCGCCC AGACCGCGAG CCGGCTCATC
ACCATGGGCG AAATGGCATC CAGCGTGGCC CACGAGCTCA ACCAGCCGCT GACCGCCATC
AACAACTATT GCAATGGCAT GGTGTCGCGC ATCAAGGGCC AGCAAATCAG CAATGAGGAC
CTGCTGATCG CGCTCGACAA GACCGCCCGG CAGGCGCACC GTGCCGGCCA GATCATCCAG
CGCATCCGCT CCTTTGTGAA ACGCAGCGAG CCCAACCGAA CCTCTGCCGA TGTCGCCACC
ATGGTCAGCA ACGCCATGGA GCTGGCCGAC ATCGAGTTGC GCCGCCACCA TGTGCGGCTG
AGCCACTACA TCGCGGCCCG TTTGCCCAAC ATCATGGTGG ACCCCATCCT GATCGAACAG
GTGCTCATCA ACCTGATGAA AAATGCGGCC GAGTCGATTG AGCAGGCGCA CCTGCCCACG
GCCCGCCGCA GCGTGGAATT GCGCGTCGTA CCCAAGCACA TCGAGGACCA GAGTGTGGTG
GAGTTTTCGG TCCTTGACTC GGGCCGGGGC CTGTCGCCGG AAGTCAAGGC ACGGCTCTAT
GAAGCCTTCT ACTCCACCAA GGCTGAGGGC ATGGGCATCG GCCTGAAACT GTGCCGCAGC
ATTGTCGAGT CCCACCAGGG CAGGATGGAG GCCGAGAACC TCTACAATGG GGACGAAGTG
GTGGGGTGCC GGTTCACTTT CTGGATCCCC GTGACGCCCC TGCTTTCACC TGCACCTTCT
GCTAGCGATA CTGTAGCGGC CAAGGATGCC GGCGTTCACT AA
|
|---|
| Protein sequence | MTMRVSPGYI SLKLLPSSMS KPSSFSDSVA ASPAPLAFWH RWWGKQSPSR QDRFITLGPL
LAVVLFLAAV IAAFAYLRIE EIDREQQAVK RDVEYAQQRL RLRLLERQEQ LMRIGRDVSN
KEVDAEEFIV QAESLVNQYP ELMTVTWIDS KRRVKVAYAS PSVHPSQSRV AGEQLKVGET
DGTYELARDL RQPVYSRPLA ANEHSGHNAP TLQLQVPLDD QGKFDGVIMG EYSIDGLLRF
GVPTEVTAKY AVTLINDKNL VLAGNLPPRR NPAARLLPWS DAAAEYEIPV SPVGNGLLIR
AEGYRASLGV VGSGFFWLVS ALSALTVWML LGTWRHTRRR VQAQQALISE TNFRRAMENS
MLTGMRALDL QGRITYVNPA FCAMTGFSES ELVGRTPPFP HWPEAEIDIL MARLDDELHG
RTPPGGFEVR VKRKNGQIFD SRMYVSPLID PRGQQTGWMT SMTDITEPKR IREELSASYE
RFTTVLEGLD AAVSVAPLGS EELLFANKLY RSWFGGEVSG HMNLIAQAGV PAAMPTEDAI
DPVDGMAGFP TDTLTTAQTE NAEIFVPDLG KWLEVRSRYL TWVDGRLAQM VIATDITPRR
HAEEQAAQQN ERAQTASRLI TMGEMASSVA HELNQPLTAI NNYCNGMVSR IKGQQISNED
LLIALDKTAR QAHRAGQIIQ RIRSFVKRSE PNRTSADVAT MVSNAMELAD IELRRHHVRL
SHYIAARLPN IMVDPILIEQ VLINLMKNAA ESIEQAHLPT ARRSVELRVV PKHIEDQSVV
EFSVLDSGRG LSPEVKARLY EAFYSTKAEG MGIGLKLCRS IVESHQGRME AENLYNGDEV
VGCRFTFWIP VTPLLSPAPS ASDTVAAKDA GVH
|
|---|
| |