| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_2616 |
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| Symbol | |
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| ID | 4014726 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 2746997 |
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| End bp | 2747821 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637942278 |
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| Product | putative transmembrane protein |
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| Protein accession | YP_549430 |
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| Protein GI | 91788478 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4105] DNA uptake lipoprotein |
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| TIGRFAM ID | [TIGR03302] outer membrane assembly lipoprotein YfiO |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.236094 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTTCCA CCAAATTATC GGTTGTTCCC AATGCATCGC CGCTTGTCGC AGCCGTTTGC
GCATTGTCTT TTGTAGTTGC AGGCTGCTCC ACGACGCCCG AGCCGGATAA AACCGCCACC
TGGAGCCCCA ACAAGATTTA CGCGGAGGCG AAAGACGAAG CCAGCTCAGG CGCCTACGAC
AAGGCCATTC CCCTTTACGA AAAGCTGGAA GGCCGGGCGG CTGGAACGCC CCTCGCGCAG
CAGGCCCAGA TTGAAAAGGC CTATGCCCAG TACAAAGGCG GTGAGCAGCC CCAGGCGATC
GCAACCCTGG ACCGGTTCAT GAAACTGCAC CCGGCCAGTC CTGCCATGGA TTACGCGCTG
TACCTCAAAG GCCTGGTGAA CTTCAACGAC AATCTTGGCC TTTTCTCGTT CATCTCGCGT
CAGGATTTGT CAGAGCGCGA TCAGAAGGCA GCCAAGGAAT CGTTCGAGTC GTTCAGGGAC
CTCGTGAACC GCTTTCCAGA CTCACGCTAT ACGCCGGATG CGCGCCTGCG CATGGCCTAC
ATTGTGAATT CGCTGGCGCA ATCGGAAGTG CACGTCGCCA GGTACTACTA TTCCCGGGGC
GCCTACGTTG CCGCCATCAA TCGGGCCCAG GCCGCCATCG CGGAGTACCG CGATGTTCCC
GCGCTCGAAG AGGCTACCTA CATCCTCTAC AAATCCTACG ACGCACTGGG CATGGTGGAG
TTGCGCGATG ACATGCGCCG CATCATGGAA AAATCCTACC CACAGAGCCA ATACATGAGC
AAGGGCTTCA AGTCGGTAGA CAACCCATGG TACAAGTTCT GGTAA
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| Protein sequence | MFSTKLSVVP NASPLVAAVC ALSFVVAGCS TTPEPDKTAT WSPNKIYAEA KDEASSGAYD
KAIPLYEKLE GRAAGTPLAQ QAQIEKAYAQ YKGGEQPQAI ATLDRFMKLH PASPAMDYAL
YLKGLVNFND NLGLFSFISR QDLSERDQKA AKESFESFRD LVNRFPDSRY TPDARLRMAY
IVNSLAQSEV HVARYYYSRG AYVAAINRAQ AAIAEYRDVP ALEEATYILY KSYDALGMVE
LRDDMRRIME KSYPQSQYMS KGFKSVDNPW YKFW
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