Gene Bpro_2605 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_2605 
Symbol 
ID4014754 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp2735294 
End bp2736439 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content65% 
IMG OID637942267 
ProductPyrrolo-quinoline quinone 
Protein accessionYP_549419 
Protein GI91788467 
COG category[S] Function unknown 
COG ID[COG1520] FOG: WD40-like repeat 
TIGRFAM ID[TIGR03300] outer membrane assembly lipoprotein YfgL 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.646508 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.623065 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGATGC AGTCTTTTAG GCCCCTGGCC CAGATTTCTC GGCTGCCCTT GGCCATTTGT 
TTTGTAGCTC TGCTGGCTGG CTGCTTTGGC GGCGCCACCA AGCCCCAGCC GGCCGAACTG
CAGCCGGTGA CGGCCCTGGT ATCCGCTCGC CAGAGCTGGA ACACCCGCAT TGGGCAGGTC
GATTTCCCTC TGGACGTGGC TGTTTCGGGC ACCAGCGTTG CCATTGCGAG CGGCGACGGT
ACGATCGCCC TTTTGGATGC TGCGACAGGC CGGGAGTTCT GGCGCGCGAG TCTCAATACG
CCGGTTGCAG CAGGTGTGGG CAGCGACGGC AAGGTTTTGG CCGTGGTCAC GAAGGCCAAC
GAGGTCGTTG CCCTGCAGGA TGGGCGGGAA ATCTGGCGCC AGAAACTCAA TGCGCAAGCC
TTCACCGCCC CTTTTGTAGC CGGTGCGCGG GTGTTCGTCC TGGCAGCGGA CCGGTCGGTC
ACTGCTTTTG ATGGCCAGAC GGGGCGCAAG CTGTGGGCGC AGCAACGACC CACCGAACCC
CTGGTGCTGC GCCAGTCTGG CGTGATGCTG GCGGTTGGCG ATACGCTGGT GGTGGGCCTC
GCTGGCCGCC TTGCGGGCCT GAACCCCGCC AACGGCAGCA TTCGATGGGA GGCGCCCATT
GCTTCGCCGC GCGGCATCAA TGATGTGGAA CGCCTGGTTG ACCTGGTAGG GCGTGTCAGC
CGGGACGGCG ACAATGTCTG TGCGCGGGCC TTCCAGGCCA GCATTGGCTG CGTCAATGCC
GCGCGCGGCA GCCTGTTGTG GGCCAAGCCG GCCAATGGCA TGCAGGGTAT TCATGGCGAT
GACCGCATGC TGTTTGGCAC GGAAGCCGAC GGGACGGTGA TCGCTTGGCG GCGCACCGAT
GGCGAGCGAA GCTGGACCAC AGACCGCCTG CGTTATCGCA GCCTGACGGC ACCCCTGATC
GTGGGGCGTT CCGTGGCGAT TGGCGACTTC AGCGGTTTTA TCCATTTGCT GTCGCGGGAA
GACGGCTCTC TCCTTAATCG CCTGCCGACC GACGGCTCGG CCATTGCCGC GGCTCCCGTG
CTCGCCGGCA ACACGCTGAT CGCCGTGACC CACAACGGTG GGGTTTACGG TTTCAAGCCT
GAGTAA
 
Protein sequence
MMMQSFRPLA QISRLPLAIC FVALLAGCFG GATKPQPAEL QPVTALVSAR QSWNTRIGQV 
DFPLDVAVSG TSVAIASGDG TIALLDAATG REFWRASLNT PVAAGVGSDG KVLAVVTKAN
EVVALQDGRE IWRQKLNAQA FTAPFVAGAR VFVLAADRSV TAFDGQTGRK LWAQQRPTEP
LVLRQSGVML AVGDTLVVGL AGRLAGLNPA NGSIRWEAPI ASPRGINDVE RLVDLVGRVS
RDGDNVCARA FQASIGCVNA ARGSLLWAKP ANGMQGIHGD DRMLFGTEAD GTVIAWRRTD
GERSWTTDRL RYRSLTAPLI VGRSVAIGDF SGFIHLLSRE DGSLLNRLPT DGSAIAAAPV
LAGNTLIAVT HNGGVYGFKP E