Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_2600 |
Symbol | |
ID | 4014749 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | - |
Start bp | 2730016 |
End bp | 2730918 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637942262 |
Product | HflC protein |
Protein accession | YP_549414 |
Protein GI | 91788462 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
TIGRFAM ID | [TIGR01932] HflC protein |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.558304 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.617958 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAATAGAG TTGGATTTTT CGTATCTTCA TTGCTGGTGG TGCTGGCGCT GCTGAGTTCC ACCCTGTTTG TCGTCGACCA GCGTCAGTTT GGCGTGGTCT ATGCGCTGGG TCAGATCAAG GAGGTCGTTA CCGACCCCGG GCTTCATGCC AAGCTGCCAC CGCCATTCCA GAATGTGTCA TACATCGACA AGCGTCTGCT GGTGCTCGAC AGCGTCGATG CCGAGCCGAT GCTGACCGCC GAGAAGCAGC GCGTGGTGAT TGACTGGTAT GTTCGCTGGC GCATCACGCA GCCTACCGAA TACATCCGCA ATGTCGGCCT GGATGAAAAG GCCGGCGCCA ACCAGTTGAG CCGCGTGGTG CGCAATGCGT TTCAGGAAGA GATCAACAAA CGCACGGTCA AGGATTTGCT GTCGCTCAAA CGCGAGGCCC TGATGGCCGA CGTCAAGCGC GAGGTGCTGC AGGTGGTGCA GGGCGCCAAG CCCTGGGGTG TGGACGTGGT CGATGTTCGC ATCACCCGCG TGGACTACGT GGAGGCTATC ACCGATTCGG TTTACAAGCG CATGGTGGCC GAACGTCAGC GCGTGGCCAA TGAGTTGCGC TCAACCGGTG CGGCTGAAGG TGAAAAAATC CGGGCCGATG CCGACAGGCA GCGTGAAGTT GCGGTTGCCA ATGCTTACCG CGACGCACAG AAGGTCAAAG GCGAGGGCGA TGCGGAAGCG GCCCGAACCT ATGCGGAATC CTTCGGCCGT GATCCGCAGT TTGCCCAGTT CTACCGAAGT CTGGATGCGT ACAAGGCCAG CTTCGGCAAG AAAAACGACG TGATGGTGCT CGACCCATCC TCCGAATTCT TCAAGGCCAT GCGTGGATCG GGTAGTGGCG CAGCGGCGCC CGCCAAAAAA TAA
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Protein sequence | MNRVGFFVSS LLVVLALLSS TLFVVDQRQF GVVYALGQIK EVVTDPGLHA KLPPPFQNVS YIDKRLLVLD SVDAEPMLTA EKQRVVIDWY VRWRITQPTE YIRNVGLDEK AGANQLSRVV RNAFQEEINK RTVKDLLSLK REALMADVKR EVLQVVQGAK PWGVDVVDVR ITRVDYVEAI TDSVYKRMVA ERQRVANELR STGAAEGEKI RADADRQREV AVANAYRDAQ KVKGEGDAEA ARTYAESFGR DPQFAQFYRS LDAYKASFGK KNDVMVLDPS SEFFKAMRGS GSGAAAPAKK
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