Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_2578 |
Symbol | |
ID | 4014766 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | - |
Start bp | 2699296 |
End bp | 2700531 |
Gene Length | 1236 bp |
Protein Length | 411 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637942240 |
Product | extracellular ligand-binding receptor |
Protein accession | YP_549392 |
Protein GI | 91788440 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.436298 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.373423 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAATG TCATTCGTGT CGTTGCTGTT TGTGCGGTAT TGGCCTGTTC AGGCGCGACC TGGGCCCAAA AAGGCGAGAC CGTCAGGATC GCCCTGATTG AAGGCCTGTC CGGCTCGTTT GGCAACGTCG GCCAGAATCA ACTTAAAAGT TGGCAGTTCC TGGCAGAAAA CCTTAACGCG GCAAACAACG TAGCGGGTGT CAAGTTTGAA ATTGTCGGCA TGGACAGCAA GGGCTCGCCC CAGGAGGCGC TCAACACTTT CAAGGCGGCG GTCGATCAGG GCTTTCGCTA CATCGCGCAA GGCAACGGTT CAGGCGCGGC TCTGGCCCTG TCTGATGCGG TGGCCAAGCA CAATGAGCGT AATCCGGGCA AAGAGGTGGT GTACCTGAAT TACGCCGCAG TAGATCCGGC GCTGACCAAC GAAAAATGCA ACTACTGGCA TTTCAGGCTG GATGCCGACA CCTCCCAGAA AATGGAAGCG CTGACCAGCT TCATGAAAGA CCAGTCCATG GTCAAGAAGG TCTATCTGCT CAACCAGAAC TATTCCCACG GACAGCAGGT GGCCAAGTAT TTCAAGGAAG GCATGGCCCG CAAGCGGCCT GACTCATCGA TTGTGGGTGA TGATCTGGTG CCGCTTGGGC AGGTCAAGGA CTTTTCCCCC TATGTCGCCA AGATCAAGCA GTCGGGTGCC GACACCATCG TCACCGGCAA CTGGGGTGCT GACCTGACCC TGTTCGTCAA GGCATTGAAC GACGCGGGGC TCAAGCTGCC CCTGTACACC TACTATGCAG CCGTGTCGGG CACGCCGACG GTATTGGCCG CCGGCGGCGA AACCGAGGTT TACCAGATTT CGTATGGCCA TTCCAACCAC ACTGGAGCGC TGGCCAAACT CACGAGTGAC TATCAGAAGA AGTTTGGCGA CGACTTCTAC ACCTACTCCA TCTACAACGG CATCCTGCTG ATGAGCGAGG CCATGGCCAA GGCGAAATCC ACTGACCCGG TCAAGGTGGC CGCGGTCATG AACGGTTTGC GTTTCAAGGG CTTCAACGGC GATTCCGAGA TGCGCAAATC GGACAACCAG ATGCAGCAGG GCCTTTACAT CTCCAAATGG CAGAAGGTCG ACAAGAAGTA TCCATACAGC GTGGAAAAAA CAGGCTATAC CTTTGCGCCG GTCAAGTACA TCGAATCCTA TGTGGCCAGC ACCCCCACCA GCTGCCAGAT GAAACGCCCC TCCTGA
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Protein sequence | MKNVIRVVAV CAVLACSGAT WAQKGETVRI ALIEGLSGSF GNVGQNQLKS WQFLAENLNA ANNVAGVKFE IVGMDSKGSP QEALNTFKAA VDQGFRYIAQ GNGSGAALAL SDAVAKHNER NPGKEVVYLN YAAVDPALTN EKCNYWHFRL DADTSQKMEA LTSFMKDQSM VKKVYLLNQN YSHGQQVAKY FKEGMARKRP DSSIVGDDLV PLGQVKDFSP YVAKIKQSGA DTIVTGNWGA DLTLFVKALN DAGLKLPLYT YYAAVSGTPT VLAAGGETEV YQISYGHSNH TGALAKLTSD YQKKFGDDFY TYSIYNGILL MSEAMAKAKS TDPVKVAAVM NGLRFKGFNG DSEMRKSDNQ MQQGLYISKW QKVDKKYPYS VEKTGYTFAP VKYIESYVAS TPTSCQMKRP S
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