Gene Bpro_2578 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_2578 
Symbol 
ID4014766 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp2699296 
End bp2700531 
Gene Length1236 bp 
Protein Length411 aa 
Translation table11 
GC content56% 
IMG OID637942240 
Productextracellular ligand-binding receptor 
Protein accessionYP_549392 
Protein GI91788440 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.436298 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.373423 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAATG TCATTCGTGT CGTTGCTGTT TGTGCGGTAT TGGCCTGTTC AGGCGCGACC 
TGGGCCCAAA AAGGCGAGAC CGTCAGGATC GCCCTGATTG AAGGCCTGTC CGGCTCGTTT
GGCAACGTCG GCCAGAATCA ACTTAAAAGT TGGCAGTTCC TGGCAGAAAA CCTTAACGCG
GCAAACAACG TAGCGGGTGT CAAGTTTGAA ATTGTCGGCA TGGACAGCAA GGGCTCGCCC
CAGGAGGCGC TCAACACTTT CAAGGCGGCG GTCGATCAGG GCTTTCGCTA CATCGCGCAA
GGCAACGGTT CAGGCGCGGC TCTGGCCCTG TCTGATGCGG TGGCCAAGCA CAATGAGCGT
AATCCGGGCA AAGAGGTGGT GTACCTGAAT TACGCCGCAG TAGATCCGGC GCTGACCAAC
GAAAAATGCA ACTACTGGCA TTTCAGGCTG GATGCCGACA CCTCCCAGAA AATGGAAGCG
CTGACCAGCT TCATGAAAGA CCAGTCCATG GTCAAGAAGG TCTATCTGCT CAACCAGAAC
TATTCCCACG GACAGCAGGT GGCCAAGTAT TTCAAGGAAG GCATGGCCCG CAAGCGGCCT
GACTCATCGA TTGTGGGTGA TGATCTGGTG CCGCTTGGGC AGGTCAAGGA CTTTTCCCCC
TATGTCGCCA AGATCAAGCA GTCGGGTGCC GACACCATCG TCACCGGCAA CTGGGGTGCT
GACCTGACCC TGTTCGTCAA GGCATTGAAC GACGCGGGGC TCAAGCTGCC CCTGTACACC
TACTATGCAG CCGTGTCGGG CACGCCGACG GTATTGGCCG CCGGCGGCGA AACCGAGGTT
TACCAGATTT CGTATGGCCA TTCCAACCAC ACTGGAGCGC TGGCCAAACT CACGAGTGAC
TATCAGAAGA AGTTTGGCGA CGACTTCTAC ACCTACTCCA TCTACAACGG CATCCTGCTG
ATGAGCGAGG CCATGGCCAA GGCGAAATCC ACTGACCCGG TCAAGGTGGC CGCGGTCATG
AACGGTTTGC GTTTCAAGGG CTTCAACGGC GATTCCGAGA TGCGCAAATC GGACAACCAG
ATGCAGCAGG GCCTTTACAT CTCCAAATGG CAGAAGGTCG ACAAGAAGTA TCCATACAGC
GTGGAAAAAA CAGGCTATAC CTTTGCGCCG GTCAAGTACA TCGAATCCTA TGTGGCCAGC
ACCCCCACCA GCTGCCAGAT GAAACGCCCC TCCTGA
 
Protein sequence
MKNVIRVVAV CAVLACSGAT WAQKGETVRI ALIEGLSGSF GNVGQNQLKS WQFLAENLNA 
ANNVAGVKFE IVGMDSKGSP QEALNTFKAA VDQGFRYIAQ GNGSGAALAL SDAVAKHNER
NPGKEVVYLN YAAVDPALTN EKCNYWHFRL DADTSQKMEA LTSFMKDQSM VKKVYLLNQN
YSHGQQVAKY FKEGMARKRP DSSIVGDDLV PLGQVKDFSP YVAKIKQSGA DTIVTGNWGA
DLTLFVKALN DAGLKLPLYT YYAAVSGTPT VLAAGGETEV YQISYGHSNH TGALAKLTSD
YQKKFGDDFY TYSIYNGILL MSEAMAKAKS TDPVKVAAVM NGLRFKGFNG DSEMRKSDNQ
MQQGLYISKW QKVDKKYPYS VEKTGYTFAP VKYIESYVAS TPTSCQMKRP S