| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_2572 |
|---|
| Symbol | |
|---|
| ID | 4014760 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | - |
|---|
| Start bp | 2691787 |
|---|
| End bp | 2692962 |
|---|
| Gene Length | 1176 bp |
|---|
| Protein Length | 391 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637942234 |
|---|
| Product | acetyl-CoA acetyltransferase |
|---|
| Protein accession | YP_549386 |
|---|
| Protein GI | 91788434 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0183] Acetyl-CoA acetyltransferase |
|---|
| TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.187641 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.563267 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCTCAG CCGTAATAGT TTCCACCGCC CGCACCCCCC TGGCCAAAAG CTGGAAGGGC
TCTTTCAACA TGACGCACGG TGCTACCCTG GGCGGCCACG CCGTAGAGCA TGCCCTCAAG
CGCGCCGGCA TTGATGCGGC CGAAGTTGAC GACGTCATCA TGGGTTGCGC CACACCCGAA
GGCGCCACCG GCGCCAACAT TGCGCGCCAG ATTGCGCTGC GCGCCGGTTG CCCGGTCACC
GTGTCGGGCA TGACCGTTAA CCGTTTTTGC TCATCCGGCC TGCAGACCAT CGCCCTGGCG
GCGCAGCGCG TGATCGCCGG TGAGGCCGAT ATCTACGTGG CTGGCGGCGT GGAAAGCATC
TCCTGCGTGC AGCAGGAAAT GAATACCCAC ATGCTGCAGG AAAGCTGGCT TGCCAAAAAC
AAACCCGAGA TTTACTGGAA CATGCTGCAA ACCGCCGAGC AGGTCGCCAA GCGCTACAAC
ATCTCGCGTG ACCGCATGGA CGAATACGGC GCGCTCAGCC AGCAAAAGGC CGCGGCTGCA
CTCGCTGCCG GCCGCTTTGA AGCCGAGATC GCACCCATTA CCGTCACAGC TGGCGTAGCC
GATCCGGTGA TGGGCCTGAT CACCAAACAG GTCACCGTGA GCAAGGATGA GGGCATTCGC
GAAGGCACCA CCAAGGAGGG CATCAGCGGC ATCAAGCCGG CCATCCCCGG GGGTGTCATT
GCGGCCGGCA ATGCCAGCCA GTTCTCCGAT GGTGGTGGCG CGGTGGTGGT GATGGGCGAG
AAAGTAGCTG AAAAAAAGGG CCTGAAACCG CTGGGTCGTT TTCTGGGCTT TGCGGTGGCT
GGCTGCGAGC CCGACGAAAT GGGCATCGGT CCGGTTTTCG CCATTCCCAA GGTGCTGGCC
AAACTGGGCC TGAAGATCAG CGACATCGAC CTCTGGGAGC TGAACGAAGC CTTTGCCGTG
CAGGTGCTGT ACTGCGCCGA CAAGCTGGGC ATTCCCATGG ACCGGCTCAA TGTCAACGGT
GGCGCCATTG CCGTCGGCCA CCCTTACGGC GTCACGGGTC AGCGCCTCAC CGGCCACGCC
CTGATCGAAG GCAAGCGTCG CGGCGCCAAA CGTGTTTGTG TGACCATGTG CATTGGCGGC
GGCATGGGTG CTGCAGGTAT TTACGAAGTC CTGTAA
|
|---|
| Protein sequence | MTSAVIVSTA RTPLAKSWKG SFNMTHGATL GGHAVEHALK RAGIDAAEVD DVIMGCATPE
GATGANIARQ IALRAGCPVT VSGMTVNRFC SSGLQTIALA AQRVIAGEAD IYVAGGVESI
SCVQQEMNTH MLQESWLAKN KPEIYWNMLQ TAEQVAKRYN ISRDRMDEYG ALSQQKAAAA
LAAGRFEAEI APITVTAGVA DPVMGLITKQ VTVSKDEGIR EGTTKEGISG IKPAIPGGVI
AAGNASQFSD GGGAVVVMGE KVAEKKGLKP LGRFLGFAVA GCEPDEMGIG PVFAIPKVLA
KLGLKISDID LWELNEAFAV QVLYCADKLG IPMDRLNVNG GAIAVGHPYG VTGQRLTGHA
LIEGKRRGAK RVCVTMCIGG GMGAAGIYEV L
|
|---|
| |