| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_2557 |
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| Symbol | |
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| ID | 4014784 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 2678375 |
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| End bp | 2679319 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637942219 |
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| Product | type II secretion system protein |
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| Protein accession | YP_549371 |
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| Protein GI | 91788419 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2064] Flp pilus assembly protein TadC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.59617 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.347898 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACTC TTCAACTTGC GTTTCTGGGG CTGATTTTTG TGGCTGTTTT CGGTGTCGTC
ATGCTGGCGC TGCGCCTGTT TGCAGCCAAC CCTGTGCAGG ACCGCCTGGA TGTCGCCGTT
GGCCGTTCGA CCCCGATTGC CAACGACGAA CCCAACCCAT GGGTGGCACG CATCATCAAA
TTGAGCGGGC CGCTGGCCAA GCTTTCCTTG CCCAGCGATG GCTGGGAAAT GTCAGCGCTG
CGTACGCGTT TCATGAATGC GGGTTTTCGC CAGCCTTCTG CTCCGGCCAT CTACTTTGCC
GCCAAAACGA CACTGGCCGC CGGCCTGCCG CTGATGGCGT TTTTTATCCT GAGTACGGGT
GGTGCAAAGT ACGGCACCAA CACGCTGCTG TTCTGGCTGC TCAGTGCGGC AGCTTTCGGG
TACTACCTGC CCAACGTTTT ACTGAAGAAC CTGATTTCGC GCCGCCAGCG GGAGATATTC
GAGAGCTTTC CAGATGCCCT GGATTTGATG ACCGTCTGTG TGGAGGCTGG GCTTGCCATG
GACGCGGCGC TCGCCCGCGT TGCATCCGAG ATTGGCCTGA AAAGCGCCGT GTTGAGTGAA
GAACTCCAAC TGGTCACACT CGAACTGCGT GCAGGCAGCT CCAAGGAAAA GGCCCTGCGC
AACCTCGCGC TTCGTACCGG CGTCGATGAT GTCGACGCCC TGGTCGCCAT GCTGATCCAG
TCGGAGCGTT TCGGCACCAG CATTGCCGAC TCGCTGCGGG TGCAGTCAGA CCAGTTGCGC
ACCAAGCGCC GCCAGCGCGC TGAAGAACAG GCCGCAAAAA TTGCGCTGAA GCTGCTGTTT
CCGTTGATAT TTTTCATTTT CCCATCCCTG CTGGTCGTGC TGATGGGGCC GGCATTCATC
CAGATTTACC GCGTACTGCT GCCCACCATG GCCGGCGGCA ATTGA
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| Protein sequence | MTTLQLAFLG LIFVAVFGVV MLALRLFAAN PVQDRLDVAV GRSTPIANDE PNPWVARIIK
LSGPLAKLSL PSDGWEMSAL RTRFMNAGFR QPSAPAIYFA AKTTLAAGLP LMAFFILSTG
GAKYGTNTLL FWLLSAAAFG YYLPNVLLKN LISRRQREIF ESFPDALDLM TVCVEAGLAM
DAALARVASE IGLKSAVLSE ELQLVTLELR AGSSKEKALR NLALRTGVDD VDALVAMLIQ
SERFGTSIAD SLRVQSDQLR TKRRQRAEEQ AAKIALKLLF PLIFFIFPSL LVVLMGPAFI
QIYRVLLPTM AGGN
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