Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_2555 |
Symbol | |
ID | 4014782 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | + |
Start bp | 2675933 |
End bp | 2677327 |
Gene Length | 1395 bp |
Protein Length | 464 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637942217 |
Product | type II secretion system protein E |
Protein accession | YP_549369 |
Protein GI | 91788417 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.174933 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.12963 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGCAG AAAACATCTC AATCAGGGAA CGCCTGGGCA CCGGGGGCGG CAGCGGCAAT GTCAACGGCG CCATGAAGGG TACCGCGCAA ATTTCCAGCT CGCGCCCAGG CGGCATCGAC AACCGCGCCT ATCAGGAGCT GAAGCACCAC ATCCACCAAA CCCTGCTGGA CCGGGTTGAC CTGGAAAGCA TGCAGCGCCT TTCGCAGGTG CAGATTCGGG AAGAGCTGCG GATGCTCGTC GAACGCCTGC TCGAGGAAGA AGTCGTCGTC ATCAACGAGA CCGAGCGAAA GAACCTGACG CGCGATATCC AGAACGAGAT GCTCGGGTTT GGTCCGCTGG AGACGCTGCT GGCCGACCCA ACCGTGTCCG ACATACTCGT CAACACCTAC AAGCAGGTGT ACGTGGAGCG CAGGGGCAAG CTGGAGCTGA CCGATGTGAC GTTCTCCAAT GACGCGCACC TGATGAAGAT CATTGACAAG ATTGTCTCGC GTGTTGGCCG GCGCATTGAT GAGTCCAGCC CCATGGTGGA CGCGCGACTG CCCGACGGCT CGCGTGTCAA TGCCATCATT CCGCCGCTCG CCATTGATGG CCCCATCATG TCGATTCGCC GGTTTGCCGC CCAACCGCTG CGCCTGGCCG ATCTGGTCGA ATTCAAGAGC CTGACCGCTG AAATGGCGGA AATTCTGCGG GGGCTGGGCA AGGCCAAGGT CAACATCCTG ATCTCTGGCG GCACAGGCAG CGGCAAGACC ACCATGCTCA ATGTGATCTC GGGCTTCATC AGCGAGGCCG AACGCATCGT GACCGTGGAG GATGCGGCCG AGCTGCAACT TCAGCAGCCG CACATCGTGC GCCTGGAGAC ACGCCCGCCG AATATCGAGG GCAAGGGCGA GGTGACCCAG CGGGCGCTGG TGCGCAACGC GCTGCGCATG CGACCAGACC GCATCATTCT GGGCGAGGTG CGCGGCGGCG AGGCGCTAGA CATGCTGCAG GCCATGAACA CCGGTCATGA GGGATCGATG GCCACCATAC ACGCCAACAC CTCGCGCGAT GCGCTCACCC GGCTGGAGAA CATGGTCAGT ATGGCCGTGG CGACCTTGCC CACCAAGGCC ATGCGCCAGC AGATCAGCTC GGCGATCAGC GTGGTGGTGC AGGTGGCGCG GCTGACCGAT GGCAAGCGCA AGATAGTTTC CGTCCAGGAG ATCACCGGCA TGGAAGGCGA AGTGATCACC ATGCAGGAAA TTTTTACCTT CAAACAGACA GGACTGGGCG AAAACGGCGC AGTTCTCGGG TATTTCTGTG CCACCGGTGT TCGCCCGCGA TTTCTGGAGA GGCTGCAGGC GTTTGGTATC AGCGTTTCAG ACAAACTGTT TGACCCCACA CGGCAGTATC ACTGA
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Protein sequence | MNAENISIRE RLGTGGGSGN VNGAMKGTAQ ISSSRPGGID NRAYQELKHH IHQTLLDRVD LESMQRLSQV QIREELRMLV ERLLEEEVVV INETERKNLT RDIQNEMLGF GPLETLLADP TVSDILVNTY KQVYVERRGK LELTDVTFSN DAHLMKIIDK IVSRVGRRID ESSPMVDARL PDGSRVNAII PPLAIDGPIM SIRRFAAQPL RLADLVEFKS LTAEMAEILR GLGKAKVNIL ISGGTGSGKT TMLNVISGFI SEAERIVTVE DAAELQLQQP HIVRLETRPP NIEGKGEVTQ RALVRNALRM RPDRIILGEV RGGEALDMLQ AMNTGHEGSM ATIHANTSRD ALTRLENMVS MAVATLPTKA MRQQISSAIS VVVQVARLTD GKRKIVSVQE ITGMEGEVIT MQEIFTFKQT GLGENGAVLG YFCATGVRPR FLERLQAFGI SVSDKLFDPT RQYH
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