Gene Bpro_2555 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_2555 
Symbol 
ID4014782 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp2675933 
End bp2677327 
Gene Length1395 bp 
Protein Length464 aa 
Translation table11 
GC content61% 
IMG OID637942217 
Producttype II secretion system protein E 
Protein accessionYP_549369 
Protein GI91788417 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4962] Flp pilus assembly protein, ATPase CpaF 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.174933 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.12963 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGCAG AAAACATCTC AATCAGGGAA CGCCTGGGCA CCGGGGGCGG CAGCGGCAAT 
GTCAACGGCG CCATGAAGGG TACCGCGCAA ATTTCCAGCT CGCGCCCAGG CGGCATCGAC
AACCGCGCCT ATCAGGAGCT GAAGCACCAC ATCCACCAAA CCCTGCTGGA CCGGGTTGAC
CTGGAAAGCA TGCAGCGCCT TTCGCAGGTG CAGATTCGGG AAGAGCTGCG GATGCTCGTC
GAACGCCTGC TCGAGGAAGA AGTCGTCGTC ATCAACGAGA CCGAGCGAAA GAACCTGACG
CGCGATATCC AGAACGAGAT GCTCGGGTTT GGTCCGCTGG AGACGCTGCT GGCCGACCCA
ACCGTGTCCG ACATACTCGT CAACACCTAC AAGCAGGTGT ACGTGGAGCG CAGGGGCAAG
CTGGAGCTGA CCGATGTGAC GTTCTCCAAT GACGCGCACC TGATGAAGAT CATTGACAAG
ATTGTCTCGC GTGTTGGCCG GCGCATTGAT GAGTCCAGCC CCATGGTGGA CGCGCGACTG
CCCGACGGCT CGCGTGTCAA TGCCATCATT CCGCCGCTCG CCATTGATGG CCCCATCATG
TCGATTCGCC GGTTTGCCGC CCAACCGCTG CGCCTGGCCG ATCTGGTCGA ATTCAAGAGC
CTGACCGCTG AAATGGCGGA AATTCTGCGG GGGCTGGGCA AGGCCAAGGT CAACATCCTG
ATCTCTGGCG GCACAGGCAG CGGCAAGACC ACCATGCTCA ATGTGATCTC GGGCTTCATC
AGCGAGGCCG AACGCATCGT GACCGTGGAG GATGCGGCCG AGCTGCAACT TCAGCAGCCG
CACATCGTGC GCCTGGAGAC ACGCCCGCCG AATATCGAGG GCAAGGGCGA GGTGACCCAG
CGGGCGCTGG TGCGCAACGC GCTGCGCATG CGACCAGACC GCATCATTCT GGGCGAGGTG
CGCGGCGGCG AGGCGCTAGA CATGCTGCAG GCCATGAACA CCGGTCATGA GGGATCGATG
GCCACCATAC ACGCCAACAC CTCGCGCGAT GCGCTCACCC GGCTGGAGAA CATGGTCAGT
ATGGCCGTGG CGACCTTGCC CACCAAGGCC ATGCGCCAGC AGATCAGCTC GGCGATCAGC
GTGGTGGTGC AGGTGGCGCG GCTGACCGAT GGCAAGCGCA AGATAGTTTC CGTCCAGGAG
ATCACCGGCA TGGAAGGCGA AGTGATCACC ATGCAGGAAA TTTTTACCTT CAAACAGACA
GGACTGGGCG AAAACGGCGC AGTTCTCGGG TATTTCTGTG CCACCGGTGT TCGCCCGCGA
TTTCTGGAGA GGCTGCAGGC GTTTGGTATC AGCGTTTCAG ACAAACTGTT TGACCCCACA
CGGCAGTATC ACTGA
 
Protein sequence
MNAENISIRE RLGTGGGSGN VNGAMKGTAQ ISSSRPGGID NRAYQELKHH IHQTLLDRVD 
LESMQRLSQV QIREELRMLV ERLLEEEVVV INETERKNLT RDIQNEMLGF GPLETLLADP
TVSDILVNTY KQVYVERRGK LELTDVTFSN DAHLMKIIDK IVSRVGRRID ESSPMVDARL
PDGSRVNAII PPLAIDGPIM SIRRFAAQPL RLADLVEFKS LTAEMAEILR GLGKAKVNIL
ISGGTGSGKT TMLNVISGFI SEAERIVTVE DAAELQLQQP HIVRLETRPP NIEGKGEVTQ
RALVRNALRM RPDRIILGEV RGGEALDMLQ AMNTGHEGSM ATIHANTSRD ALTRLENMVS
MAVATLPTKA MRQQISSAIS VVVQVARLTD GKRKIVSVQE ITGMEGEVIT MQEIFTFKQT
GLGENGAVLG YFCATGVRPR FLERLQAFGI SVSDKLFDPT RQYH