| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_2548 |
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| Symbol | |
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| ID | 4014775 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 2669261 |
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| End bp | 2670115 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637942210 |
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| Product | Flp pilus assembly CpaB |
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| Protein accession | YP_549362 |
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| Protein GI | 91788410 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3745] Flp pilus assembly protein CpaB |
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| TIGRFAM ID | [TIGR03177] Flp pilus assembly protein CpaB |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.185177 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0976482 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAAACA CACGTGCATT GGTGATGATC GCCGTGGCGG TCGTCCTCGC ATTTGGAGCA
GTCATCGTGG CTGCCCGCTG GATCAGTGCC CAGGCCTCTG CAGACACCAG CAAGGTTGCG
GTGGCAGCGG TTGACATCAG CCTCGGCGCC AGGCTGAGCC CGGAAATGGT TCGCATGGTC
GATTGGCCGG CGAGTGCCAT GCCGCCCGGC GCCATCACCG ATGCCAAGCA GCTCGAAACG
CGCGTGACGC GCACCAGCAT CCAGCGCGGC GAACCCGTCA TGGAAGGCAA GCTTGCGCCG
CCCGGCACCC AGGGTGGCCT TTCTGCCGTG GTCGCAGAGG GCAAACGTGC CATGACGGTG
CGCGTCAATG ATGTGGTGGG CGTAGCCGGG TTTGCCCTGC CGGGCAACTT TGTGGACATC
CTGGTCAATA CCCAGGATGA ACCAGGAAAA GGCGGCGCGG GCAAGGACCA GACCATTTCG
AAGATCGTGT TGGAGCGCAT TCTGGTGCTG GCCATTGCCC AGGAATCAAG TCGCGACGAA
ACCAAGCCCA AGGTTGTCAA TGCCGTCACC CTCGAATTGA CACCCGACCA GGCAGAAAAA
CTTGATTTGG CGCGCAGCGT TGGCACCCTC TCGCTGGTTC TGAGGAACCA GGTCGATCCA
AACCCGGTGA ATACAAAAGG CGCGACCAAG ACAACATTGC TTGATGTCAA GGCCCCCGCG
CCCGAAGCCC GGCCTGCATC CGCGCCGAAG GCCGCAGTAA AGCCCGCGCC CAAGCGGGTG
GTCAGGCCTG CACCCGCCAC CCCAGACCGC GTTGAAGTGA TCAAGGGGCT GGAGCGCAGC
ACCCAACAAT TTTAA
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| Protein sequence | MRNTRALVMI AVAVVLAFGA VIVAARWISA QASADTSKVA VAAVDISLGA RLSPEMVRMV
DWPASAMPPG AITDAKQLET RVTRTSIQRG EPVMEGKLAP PGTQGGLSAV VAEGKRAMTV
RVNDVVGVAG FALPGNFVDI LVNTQDEPGK GGAGKDQTIS KIVLERILVL AIAQESSRDE
TKPKVVNAVT LELTPDQAEK LDLARSVGTL SLVLRNQVDP NPVNTKGATK TTLLDVKAPA
PEARPASAPK AAVKPAPKRV VRPAPATPDR VEVIKGLERS TQQF
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