| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_2546 |
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| Symbol | |
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| ID | 4014812 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 2667190 |
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| End bp | 2667768 |
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| Gene Length | 579 bp |
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| Protein Length | 192 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637942208 |
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| Product | peptidase A24A, prepilin type IV |
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| Protein accession | YP_549360 |
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| Protein GI | 91788408 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4960] Flp pilus assembly protein, protease CpaA |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.190975 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0487377 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCACG ACGGATTACT ACACTTTGGT GGAATTCAAA TCCACGTCAT AGCCGCCGTA
TTGCTGGTAT TGGTCGCTGT TGCGGCTGGG TTCGACCTCA AGTCACGGCG TATTCCTAAC
TGGCTTGTGC TCATGGGGTT GATCACGAGC TTGGCCCTCC AAATTATTTT CAGCGGCATC
GGCGGCTTCA AGGCCTGGGG CTTGGGGCTG CTGGTCGGAT TCGGGGTGTT TCTGCCCCTG
TATCTGTTGC GCGCCATGGG CGCGGGTGAC GTGAAACTCA TGGCCATGGT CGGTGCCTTT
CTCGGGCCGG TCTCAGCCCT GGGTGCGGTG CTGACAACGC TCGTCGTCGG CGGGGCGCTT
GCCATTGCCG TGGCGCTGCG GTGTGGCATT TTAAAAAATA CCCTGAAAAA TATTCGGTTC
GCACTGACGC TGGCGCTGTA CAAAGGCTTG TCCGGTGGTG GGATGCAGTT AGAGCAGCCG
TCGACCTCAG CAGGCAACCT GCCCTATGCG GTGGCGATTG CTGTAGGCAC CTTGGGTCAT
CTTCTTTTAG TGGGTAGTGG TCGTGCGGTG TTTGCTTGA
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| Protein sequence | MTHDGLLHFG GIQIHVIAAV LLVLVAVAAG FDLKSRRIPN WLVLMGLITS LALQIIFSGI
GGFKAWGLGL LVGFGVFLPL YLLRAMGAGD VKLMAMVGAF LGPVSALGAV LTTLVVGGAL
AIAVALRCGI LKNTLKNIRF ALTLALYKGL SGGGMQLEQP STSAGNLPYA VAIAVGTLGH
LLLVGSGRAV FA
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