Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_2541 |
Symbol | |
ID | 4014807 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | + |
Start bp | 2663058 |
End bp | 2663837 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637942203 |
Product | hypothetical protein |
Protein accession | YP_549355 |
Protein GI | 91788403 |
COG category | [S] Function unknown |
COG ID | [COG5429] Uncharacterized secreted protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.255646 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0076728 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCCGCAAA TCGCTACAAA ACTCATGGCT ACCACAACCC TGTTGATGGT GGCTTCCAGT ACTTTTTCAG CACAGCACCA ATGCGCAGCA AGCTCCGGCG CCACTATCAC GCCGGTGATT GAGCTCTATA CGTCCGAAGG CTGCAGCTCC TGTCCACCGG CGGACAAATG GGCATCAAGC CTCAAAGGCA AAGACGTGGT GGTCCAGGCC TTTCACGTCG GCTACTGGGA CTACCTGGGC TGGGTCGACC GCTTTGCCGC GCCGGCTTAC ACCCACCGGC AGCGCGAGCT TGCGGCCCGC AACAATCTGC GCAGCATCTA CACACCCCAA GTCGTGTTCA ATGGCCGCGA CTGGCCCAAT TGGTCCAATT GGTCCGCCGG GCTTGTGAAT CAACCCAGCG CCAGGGCTCC GGCACGTGCC AGCATCACCG TGCAACAGCT GGGTACAGAC CAGTTTGAAG CCAGCGTGAC ACCCGTTACA AACCTCCCCG GGCAGCAAGC GGCCACCAGT TGGTCTGCCT ACTGGACCAT TACCGAGCAT GGCCATAACT CCAGGGTGCA AGCCGGTGAA AACGCCGGTG AATTCCTCAA GCATGATTTT GTGGTGCGCC AGTACACGCA GGCCGGCGAC TACAAAACCG GCAGTGCGGC GGCGCCCCAA AAGCTCACCT TTCGCAGCAT TGCGCCTACC CCAGGCCATG CACGCCAGGT GAACCTGGTG GTGTTCAACA CGAAAACCGG AGGCACGATG CAGGCCGTCA GCCTGCAGTG TGCGGGCTGA
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Protein sequence | MPQIATKLMA TTTLLMVASS TFSAQHQCAA SSGATITPVI ELYTSEGCSS CPPADKWASS LKGKDVVVQA FHVGYWDYLG WVDRFAAPAY THRQRELAAR NNLRSIYTPQ VVFNGRDWPN WSNWSAGLVN QPSARAPARA SITVQQLGTD QFEASVTPVT NLPGQQAATS WSAYWTITEH GHNSRVQAGE NAGEFLKHDF VVRQYTQAGD YKTGSAAAPQ KLTFRSIAPT PGHARQVNLV VFNTKTGGTM QAVSLQCAG
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