| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_2532 |
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| Symbol | |
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| ID | 4014798 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 2648075 |
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| End bp | 2649682 |
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| Gene Length | 1608 bp |
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| Protein Length | 535 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637942195 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_549347 |
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| Protein GI | 91788395 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00384928 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGAGACCT TTATGCGTCT GTCGTCAGCA TCGAAATCGG GGAAAAATGG TTTGCTCGGG
CTGGTGCTCG CCGCACTGTT TGCGGTCACC GCGCCCATGG CCTCTGCGCA GGAATTCAAG
CTGGCGATGA GCTCGCCGCC GACCTCGCTG GATCCGCATT TCTACAACCT GTTTCCGAAC
CTGAATGTTT CCGATCATGT GTTTGAAACC CTGGTTACCA TGGATGCCGA CAGCCGGGTG
ATTCCCGGTC TGGCCGAGTC CTGGACGCTG GTCAATAACC TGACCTGGGA ATTCAAGCTG
CGCAAAGGCG TCAAGTTTCA CGATGGCAGC GAGATGACCG CCGAAGACAT TGCCTGGTCG
ATGGACAGGC CCTCGACCAT CGTTGGCAGC CCCGGCAAGT TCGATGTCTA CACCAAGGCC
ATCATCAACA AGAAAATCAT CGACCCCTAC ACCATCCGCT TCACCACCAA GGAGCCTTAC
CCGCTCATGC TGGCCGACTT GACCTCCGTT TACATCGTGT CCAAAAAGGC CACCACGGGC
ATTACGAGCG ATGATTTTTC CAGCGGCAAG GGCATGGTGG GTACCGGCCC CTTCAAGTTT
GTCAGGTACC AGAGGGATGA CCGGATCGAG CTTGATCGCA ACGACAGTTA CTGGGGCAAA
AAGGCGGCCT GGTCCAAAGT GACCATGCGC TTCATTCCGA ATGGTGCAAC GCGCCTGGCG
GCGTTGCTGG CCGGCGATGT GCAGGCAATT GAAAACGTGC CAACGCCTGA CCTGGCGAAG
GTGCGTTCCG ATGCCAGCAT TGCGCTGTAC TCCAAAGTCT CGCACCGCCT GATCTATCTG
TACCCCGACA CCAAGCGCGA CAAGTCTCCG TTTGTGACCG ACAAGGACGG CAAGGCCCTC
GACAAGAACC CGCTGCAGGA CCAGCGCGTG CGCGCCGCGC TGTCGATGGC GATCAACCGC
GAGGCGATTC GTGACCGCGT GATGGAAGGG CTGTCGGAGC CCACCAACAA CCTGGTGCCC
AAAACGCTGT TCGGCCACAA CCCGGCCTTG AAGTCCGTCA AGTACGACCC GGACGGTGCC
AAAAAGCTGC TGGCGACGGC CGGTTATCCG AACGGATTCG GGCTGACGCT GCACACACCG
AACAACCGCT ATGTGAACGA TGAAAAAATC GCACAGACCA TTGCGCAGAT GTTCTCGCGC
ATTGGCGTGG CCACCAAGGT TGAAGGCTTG CCGATGTCGG TGTATTCAGC CCGCGGTGCC
AAAAGTGAAT ACTCCATGGG TTTGCTGGGT TGGGGCGCAC AAACCGGCGA AGTCTCCTCG
CCGCTGCGTG CCCTGCTGGC CTGTGACAAC CCGGCCAAAG GCCTGGGCGG TTTCAACTGG
CTCAAATACT GCAGCCCGAA GATGGATGAG CTGCTGCAAA AAGCCCTGAA CACGGTTGAC
GACAAGGCGC GACTGGCGCT GCTGCAGGAT GCCAGCGCCA TTGCCATCAA CGATGGCGGC
CTCATTCCGA TTCATCAGCA GGTCACGACC TGGGCGACCA AAAAAGGAAT TGCCTACATT
CCGCGCACGG ATGAGCGTAC GCACGCCTAC GGGTTCATCC AGCAATAA
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| Protein sequence | METFMRLSSA SKSGKNGLLG LVLAALFAVT APMASAQEFK LAMSSPPTSL DPHFYNLFPN
LNVSDHVFET LVTMDADSRV IPGLAESWTL VNNLTWEFKL RKGVKFHDGS EMTAEDIAWS
MDRPSTIVGS PGKFDVYTKA IINKKIIDPY TIRFTTKEPY PLMLADLTSV YIVSKKATTG
ITSDDFSSGK GMVGTGPFKF VRYQRDDRIE LDRNDSYWGK KAAWSKVTMR FIPNGATRLA
ALLAGDVQAI ENVPTPDLAK VRSDASIALY SKVSHRLIYL YPDTKRDKSP FVTDKDGKAL
DKNPLQDQRV RAALSMAINR EAIRDRVMEG LSEPTNNLVP KTLFGHNPAL KSVKYDPDGA
KKLLATAGYP NGFGLTLHTP NNRYVNDEKI AQTIAQMFSR IGVATKVEGL PMSVYSARGA
KSEYSMGLLG WGAQTGEVSS PLRALLACDN PAKGLGGFNW LKYCSPKMDE LLQKALNTVD
DKARLALLQD ASAIAINDGG LIPIHQQVTT WATKKGIAYI PRTDERTHAY GFIQQ
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