Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_2531 |
Symbol | |
ID | 4014797 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | - |
Start bp | 2647021 |
End bp | 2647998 |
Gene Length | 978 bp |
Protein Length | 325 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637942194 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_549346 |
Protein GI | 91788394 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00320592 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCTCGTAT TCATCATTCG GCGGCTGCTG CAAAGCGTCG TCGTGCTGCT GGTCATGTCG CTGCTGGTGT TTGTCGGCGT GTATGCGATC GGCAATCCCA TCGACATGCT GATCAGTCCC GATGCCGACC AGCTGGACCG GGCCCGCACC ATTGCGGCCT TCGGCCTCGA CAAGCCGCTG TGGCAGCAGT ATTTTCTGTT CGTGAAGAAC GCGCTGGCCG GTGACATGGG GCGCTCATTC GCCTTCTCTG CGCCGGCGCT GACGCTGATC GTCGAGCGCA TGCCGGCGAC CATGGAGCTG GCGGTGTTTG CCATCGTGCT GTCCATCGTT CTCGGTATTC CGCTCGGCCT GTGGGCGGGG CTGCGGCCCA ATGGCATCGC CGGCAAGACC ATCATGGCTG TTTCCATTCT GGGCTTTTCG CTGCCGACTT TCTGGGTCGG CCTGATGCTG ATCATGGTGT TCGCTGTTCA GCTGGGCTGG CTGCCGTCCA GCGGACGCGG CCCGACCGAA TTGCTGCTGG GTGTGCCCGT CAGCTTTCTG TCGTTCGATG GGCTCAAGCA CCTGCTGATG CCGGCGTTCA ATCTGGCGCT CTTCAATATT GCGCTGGTGA TCCGGCTGAC GCGCGCCGGC GCCCAGGAGG CGCTACTGCA GGACTACGTC AAGTTCGCCC GCGCCAAGGG TCTGGGCAAT CGCCGCATCA TTGGCGTGCA TGTGCTGAAA AACATCCTGA TCCCGATCGT GACCGTGATC GCGCTGCAGT TCGGCTCGAT CATCGCCTTT GCCATCGTCA CGGAGTCGGT GTTCGCCTGG CCCGGCATGG GCAAGCTGAT CATTGACTCG ATCCGCTTCC TGGATCGCCC GGTGATCGTG GCTTACCTGA TGCTCATCGT GGTGATTTTC ATTGCCATCA ATCTGGTGGT CGACGTGGTC TACTCACTGC TCGATCCGCG TGTACGTTTG TCCGATAGCA AAGGCTGA
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Protein sequence | MLVFIIRRLL QSVVVLLVMS LLVFVGVYAI GNPIDMLISP DADQLDRART IAAFGLDKPL WQQYFLFVKN ALAGDMGRSF AFSAPALTLI VERMPATMEL AVFAIVLSIV LGIPLGLWAG LRPNGIAGKT IMAVSILGFS LPTFWVGLML IMVFAVQLGW LPSSGRGPTE LLLGVPVSFL SFDGLKHLLM PAFNLALFNI ALVIRLTRAG AQEALLQDYV KFARAKGLGN RRIIGVHVLK NILIPIVTVI ALQFGSIIAF AIVTESVFAW PGMGKLIIDS IRFLDRPVIV AYLMLIVVIF IAINLVVDVV YSLLDPRVRL SDSKG
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