| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_2490 |
|---|
| Symbol | |
|---|
| ID | 4014834 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | - |
|---|
| Start bp | 2608979 |
|---|
| End bp | 2609554 |
|---|
| Gene Length | 576 bp |
|---|
| Protein Length | 191 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637942153 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_549305 |
|---|
| Protein GI | 91788353 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.00445849 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0895195 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTGGAAG GATTTGCCGG TTTCCATGCC TTGAAATCAC ACCGATTCAT GTTGTCCTGC
AAGCATTTTG ACCTGTATGG CCTGCTGGCG GCCCTGCTGC TGCAGGGTTG CGCCGGCCCT
GGCCCGCTGA CCGCGGCGCG CGCGGTTGAT AGTGCGGCGG CCGACTGCCG AGGTCTGGGC
GGCCTTTACC GCGATGCGGG CGCGCCCAAT GGCGATTCGC TCGTCCATTT CCTGTTGGGC
AAGCCGCCAT CAAAAGGCCG CAGGGTGCAG ATCGACGTGA GTGCGGAAGG CCTGCGAATT
TCATCGGGCT CCACAGCGGG CACATTGGCC GCCGGCAAGG ATTTCAACTG CAGCGGCGCC
GGGCGCATCA CCCTGACCCG TCAGGAGTCC TCGCGCATCC ACTTGCCGCC GCTGATCGAT
CAAATCAAAA CCGTCACTTA CGTGTTCCAT GTTGACGCCG GCGCCAACCT GGTCCTGAGC
ACCTATGCGC AGACCAGCCT GGCCCCGTAT GGCGTGCCGC TTGAGGGACC GGCGCAGCTG
GAGTCGACGA TTACCTGGCG CCGGATATCC CCTTGA
|
|---|
| Protein sequence | MVEGFAGFHA LKSHRFMLSC KHFDLYGLLA ALLLQGCAGP GPLTAARAVD SAAADCRGLG
GLYRDAGAPN GDSLVHFLLG KPPSKGRRVQ IDVSAEGLRI SSGSTAGTLA AGKDFNCSGA
GRITLTRQES SRIHLPPLID QIKTVTYVFH VDAGANLVLS TYAQTSLAPY GVPLEGPAQL
ESTITWRRIS P
|
|---|
| |