Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_2484 |
Symbol | |
ID | 4014867 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | + |
Start bp | 2599603 |
End bp | 2600826 |
Gene Length | 1224 bp |
Protein Length | 407 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637942147 |
Product | L-carnitine dehydratase/bile acid-inducible protein F |
Protein accession | YP_549299 |
Protein GI | 91788347 |
COG category | [C] Energy production and conversion |
COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0601081 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0181338 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGGAC CCTTATCCGG CATCAAGGTA CTTGATCTCA GCCGAATCCT CGCGGGCCCG TGGAGCACGC AGCTACTTTC CGATTTGGGG GCCGATGTGA TCAAAGTCGA GCGACCTGTA GGCGGAGACG ATACCAGAGG GTGGGGGCCG CCCTTTCTTG AACGCGAGGA TGGTTCGGCA ACGGCCGAAT CCGCCTATTT TCTCTCTGCC AATCGGGGCA AGCGATCAAT CACCGTGGAT ATCAGTACGC CGGAAGGCCA GGGCATTCTG CGCGAAATGG TAAAGACAGT CGATGTGTTC GTGGAGAACT ATAAACTCGG CGACATGAGG CGCTATGGCC TGGATTACGC CGCTCTCTGC GAGATCAATC CAGGCCTGGT TTACTGCTCG ATCACAGGTT TCGGCCAAAC CGGGCCCTAC AGCAGCCGAG CGGGCTACGA CTTCGTGATC CAGGCCATGG GGGGGCTGAT GAGCATCACC GGGCAGAGTG ACGACCAGCC TGGCGGCGGC GCCCAGAAGT GCGGCGTGCC GATCTCCGAT CTGATGACCG GCATGTACGC ATCGGTCGCC ATCGTCAGTG CGTTGTTCGA GCGAACCCGC AGCGGCAAGG GCCAATACAT CGACATGAGC CTGCTCGACA CCCAGGTCGC CTGGCTCGCC AATCAGGCGT CCAACTACCT CGTATCGGGA AAGCCACCGA AGCGATGGGG CAATGCGCAT CCCAATCTCG CCCCCTACCA GTCCTTTGCC GCCAGCGATG GAGAACTGAT CGTTGCTGTC GGGAATGACC GCCAATTCGG CGCGCTGTGC CGCACGCTCG GCGTAGAAGG ATTGACCAAT GACGAACGGT ACGCCACCAA CGCCCAGCGG CTGCAGCACC GCGCAACGCT TATTCCCGCC TTGTCCGAAT TGTTCGCCCA TGCATGCAAG AGGCACTGGC TCGATCAACT CGAACGCGCG GGGGTGCCGT GCGGTCCGAT CCAGTCTATT CCCGAAGCGC TGACGGACGA GCACGTGCTG GCCCGCGGCA TGGTTTTTTC GCTGCCTCAT TCCAGCGGCG CCATGGCGCC GCAAATCGCC AATCCCATCA AGTTTTCTAG AACCAGCATC CGCTATCGAC GTGCCCCTCC AGCGCTGGGG GAGCACACCG AAGAAATACT GGCCACGGAA CTGGGCTGGT CTGCTGAGCA AATTTCCGCC TCGAAGCAAA AGGGAGCGAT TTGA
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Protein sequence | MAGPLSGIKV LDLSRILAGP WSTQLLSDLG ADVIKVERPV GGDDTRGWGP PFLEREDGSA TAESAYFLSA NRGKRSITVD ISTPEGQGIL REMVKTVDVF VENYKLGDMR RYGLDYAALC EINPGLVYCS ITGFGQTGPY SSRAGYDFVI QAMGGLMSIT GQSDDQPGGG AQKCGVPISD LMTGMYASVA IVSALFERTR SGKGQYIDMS LLDTQVAWLA NQASNYLVSG KPPKRWGNAH PNLAPYQSFA ASDGELIVAV GNDRQFGALC RTLGVEGLTN DERYATNAQR LQHRATLIPA LSELFAHACK RHWLDQLERA GVPCGPIQSI PEALTDEHVL ARGMVFSLPH SSGAMAPQIA NPIKFSRTSI RYRRAPPALG EHTEEILATE LGWSAEQISA SKQKGAI
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