| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_2477 |
|---|
| Symbol | |
|---|
| ID | 4014860 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | - |
|---|
| Start bp | 2591117 |
|---|
| End bp | 2593333 |
|---|
| Gene Length | 2217 bp |
|---|
| Protein Length | 738 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637942141 |
|---|
| Product | acyl-CoA dehydrogenase-like |
|---|
| Protein accession | YP_549293 |
|---|
| Protein GI | 91788341 |
|---|
| COG category | [C] Energy production and conversion
[I] Lipid transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases
[COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | [TIGR02823] putative quinone oxidoreductase, YhdH/YhfP family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.193974 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0198771 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGACCC AGCTCGGCAG CGACACTTCG CACGCTGTGC CCGCCTCACG TTTGCTGGAG
CTGGTGCGTC GTTTCGCGAT TAACGTGGTG GCGCCGCTGG CGGCTCAAGC AGCCTCGCAG
CAAACCTGGG CGGGCACCGC TTTGCGCCAG GCATGCGCCT TGGGCCTGGC GGGCATCGAA
GTGCCGGTCG CGCACGGCGG CCACGGCCTG CCCTTCCCGG TGCGCGTTGG CGTGGCTGAG
GCGCTTGCCG AGGTGGACTT TGCGTTCGCC TTCGCCTTCA TCAACCACCA CAACGCGATT
TTGCGCATCG CCGAGAAAGG GTCAGAGCCG GCGCGGACGA AGTACGTGGG CGCCATGCTG
AGCGGCGAGT TGATCGGCTG CACCGCCATG TCGGAAGACG GCGCAGGCAG TGATTTCACC
GCCATCGGCA CCCAGGCCCG AAAGGTCGAA GGCGGCTGGT CGCTGACGGG CGCCAAAAAA
TGGATTGCCA GCGCGAGAGG CGCCGATGTC GCGCTGGTGT TTGCTCAGAC AGACCCCGCG
TTGGGATCGG CCGGCATCGC GTGCTTCATC GTCAACCTGA ATGATCCGGC CTGCCGGCGC
GTGGCCGGTG GCGACATGGA AGGCCTGGCT TTGGCGGGCA TTGGCGGCTT TGAACTTGAT
GCGTATGTCG CCCCGGACAG TGACATGCTT TACGCACCCG GCGATGGCTT CAGGCAGGCC
ATGGCCGGTG TCAACAAGGC GCGGGTCCAC ATGGCGGCCA TGGCTTGCGG GCTGCTGCAC
GGCGCCTTGC AGCAGGCCAC GGCGTACACC GCCTCAAGAA TGGTGTTCGG GCAGCCGGTC
ATCAACCAGC AGGGTTTGCG CTGGTCGCTG GTGGACGTGG CGATGACGCA CGACATCCTG
CAGATGCTGA CGCACCGCGC GGCCGACCTC ATTCAGCAGG GCGCGCCGGA AGCCATGAAC
GCGGCGGCCA GCGCCAAGCT GTACGCGGGC AATGAAACCC TGCCCGCCGT GGGCCAATGC
ATCCAGGCGC TGGGCGCCCG GGGCATGACG CACGAACAGG GCCTGACCCG AAAGCTGCTG
GCCGCCAAGG CCTTGTGCCT GGCCGACGGC TCCAACGAGA TCATGCGCGA CCGCCTCGGC
GCCTCGGTTT TCCAGCGCTA TGCGCGCAGC TTCCGGCAGG ATAGCCCGGA CGGCCTCACT
TCAACCTCTC CTGGAGACAC GGCCATGACT ACGTTCTCAG CCCTTTACAT CACCAAAGAT
GAAAGCGGAG CCAGCCGCGC CGCCGTGCAA CTGCTCCAGC GGGACGACCT GCCCGAGGCC
GAAGTCCTCG TGCGCATCAG CCACTCCACG CTGAACTACA AGGACGCGCT CGCCATCACC
GGAAAATCCC CCGTGGTGCG CAAATTCCCC ATGGTGCCCG GCATTGACTT TGCGGGAGTC
GTGGAACGCA GCGCGGACCC GCGCTTCAAG CCCGGTGATG CCGTGCTGCT CAACGGCTGG
GGCGCGGGCG AGACGAGCTG GGGCGGGCTG TCCCAGTACG CCGCCGTAAA GGGCGACTGG
CTCATTGCGC TACCCGAAGG CATGACGACG CAACGCGCCA TGTCCATCGG CACGGCGGGC
TACACCGCCA TGCTGTGCGT GATGGCGCTG GAAAGACACG GCGTCGTGCC GGACGCCGGT
CCGGTGCTGG TCACTGGCGC CAATGGCGGC GTGGGCAGCA TCGCCATCGC CTTGCTGTCG
CGCCTGGGCT ACACGGTCAC CGCCTCGACC GGCCGCCCTG CAGAAGCGGA GTATCTTCAT
TCGCTGGGCG CTGCCGCCGT GATGGACCGC GGCCCACTTG GCGAGCCCGG GAAGCCGCTG
CAAAAGGAGT CTTGGGCAGC CGCGGTGGAC TGCGTAGGCA GCCATACGCT GGCCAACGTA
CTGGCCAGCA CCCGATACGG CGGTGTGGTG GCGGCGTGCG GCTTGGCGCA GGGCATGGAC
CTACCCGCCT CGGTCGCGCC CTTCATTCTT CGAGGCGTCA CACTCGCCGG CATCGACAGC
GTCTATGCGC CACCCGCTCA CCGTGTGACG GCATGGGGCC GCATGGCCAC GGAGCTTGCA
CCCGAGTTGG TGGAGCGCAA CACCCGCGTC ATCGGCTTGA GCGAGGCGCT GGCTGTCGCC
CCTGAGCTAC TGGCCGGCAG GGTACGGGGA CGGGTCGTCG TCGACGTTCA CAGTTAA
|
|---|
| Protein sequence | MTTQLGSDTS HAVPASRLLE LVRRFAINVV APLAAQAASQ QTWAGTALRQ ACALGLAGIE
VPVAHGGHGL PFPVRVGVAE ALAEVDFAFA FAFINHHNAI LRIAEKGSEP ARTKYVGAML
SGELIGCTAM SEDGAGSDFT AIGTQARKVE GGWSLTGAKK WIASARGADV ALVFAQTDPA
LGSAGIACFI VNLNDPACRR VAGGDMEGLA LAGIGGFELD AYVAPDSDML YAPGDGFRQA
MAGVNKARVH MAAMACGLLH GALQQATAYT ASRMVFGQPV INQQGLRWSL VDVAMTHDIL
QMLTHRAADL IQQGAPEAMN AAASAKLYAG NETLPAVGQC IQALGARGMT HEQGLTRKLL
AAKALCLADG SNEIMRDRLG ASVFQRYARS FRQDSPDGLT STSPGDTAMT TFSALYITKD
ESGASRAAVQ LLQRDDLPEA EVLVRISHST LNYKDALAIT GKSPVVRKFP MVPGIDFAGV
VERSADPRFK PGDAVLLNGW GAGETSWGGL SQYAAVKGDW LIALPEGMTT QRAMSIGTAG
YTAMLCVMAL ERHGVVPDAG PVLVTGANGG VGSIAIALLS RLGYTVTAST GRPAEAEYLH
SLGAAAVMDR GPLGEPGKPL QKESWAAAVD CVGSHTLANV LASTRYGGVV AACGLAQGMD
LPASVAPFIL RGVTLAGIDS VYAPPAHRVT AWGRMATELA PELVERNTRV IGLSEALAVA
PELLAGRVRG RVVVDVHS
|
|---|
| |