| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_2457 |
|---|
| Symbol | |
|---|
| ID | 4014879 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | - |
|---|
| Start bp | 2561847 |
|---|
| End bp | 2562767 |
|---|
| Gene Length | 921 bp |
|---|
| Protein Length | 306 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 637942122 |
|---|
| Product | putative signal peptide protein |
|---|
| Protein accession | YP_549274 |
|---|
| Protein GI | 91788322 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.28249 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0976482 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATCAGA TTCGACGCTC CGCGCTAAAA AAGAGCCTGT ACGGATTGCT GGCTCTGGCA
TTGCTTATAG CGGTTGATGT TGCCGCGGGA CAATCGCAAG AGCTGGCCAG CGAACAGAGT
GCAGCGGCGC TGCTTAAAAA GCATGAGGTG CTGACTGAGC AGCTGGCACA CAACCCGTAC
CGGCGCCCTC TGGTCCTCGA TTCCTCTGAA ACCCCCAATT CGGTCAATGG CAACGCCTAC
GCTGTGCTGG ATTCGCCTTT CAGCACCTTC AGCGCTACCT TCAAAAGCCC CCATCACTGG
TGTGACGTGC TGATCCTGCA TCTCAATACC AAGTACTGCC GCGCAAGCGC AGACACCAGC
CCCAGCAAAC TGAAGATGAG GATAGGCAAA AAAATCGCGC AGGAACTCAA CGATGCATTC
GCACTTGAAT TTACCTACCA GCTGGCGGCT GCCTCGCCCA GCTACATCGC CGCCCAGCTC
AACGCCCCCG AAGGGCCCCT GGGCACCACC AATTACCGTA TCGAGCTTCA GGCTGTACCG
CTTGGAGAGG GGAAAACCTT TATGCATTTT CGCTACTCGT ATGGGTATGG CATGGCTGGC
CGACTGGCGA TGCAGGGCTA TCTGGCAACA GTGGGAAGCG GAAAGGTCGG TTTTACTCAA
ATTAACGATG GCCAAAAATC CCGCTACGTG GGCGGCATGC GAGGCACTAT TGAGCGAAAC
ACCATGCGCT ACTACCTGGC CATCGAAGCC TTTCTCGCCT CACTGGGCCA GCCGGCAACG
CAGCAACTCA ACATGCGCCT GCGGTACTGG TTTGATGCCA CTGAAGAGTA TCCCCAGCAG
TTGCATGAGG TGAATCGGGA CAGTTACCTG AACATGAAAA AGGCCGAATA CCAGCGACAG
AAGAGTTCCT CATCTGACTG A
|
|---|
| Protein sequence | MNQIRRSALK KSLYGLLALA LLIAVDVAAG QSQELASEQS AAALLKKHEV LTEQLAHNPY
RRPLVLDSSE TPNSVNGNAY AVLDSPFSTF SATFKSPHHW CDVLILHLNT KYCRASADTS
PSKLKMRIGK KIAQELNDAF ALEFTYQLAA ASPSYIAAQL NAPEGPLGTT NYRIELQAVP
LGEGKTFMHF RYSYGYGMAG RLAMQGYLAT VGSGKVGFTQ INDGQKSRYV GGMRGTIERN
TMRYYLAIEA FLASLGQPAT QQLNMRLRYW FDATEEYPQQ LHEVNRDSYL NMKKAEYQRQ
KSSSSD
|
|---|
| |