| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_2448 |
|---|
| Symbol | |
|---|
| ID | 4014909 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | + |
|---|
| Start bp | 2550872 |
|---|
| End bp | 2551822 |
|---|
| Gene Length | 951 bp |
|---|
| Protein Length | 316 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637942113 |
|---|
| Product | muramoyltetrapeptide carboxypeptidase |
|---|
| Protein accession | YP_549265 |
|---|
| Protein GI | 91788313 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1619] Uncharacterized proteins, homologs of microcin C7 resistance protein MccF |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.941707 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAAAAAC ATATCTACAT TTACTCGCCT TCCAGCGCCG TGCGCGACAA AGCGAGCTTC
AAACGCGGCG TTCGGCGCCT GACGGCACTG GGCCATGAGG TTGAAATTGA CGAAGCTGCG
CTGGCCAGGC ACCAGCGTTT TGCCGGCGAT GACGAAACCC GGCTGGCGGC CATCCACCGC
GCGGCTGCCA GCGGCGCCGA TGTGGCTCTC ATTACCCGCG GCGGCTACGG CCTTACGCGC
ATCCTGCCGG GCATCAACTA CAAGGCTGTG GCCAAGGCCA TCGACAAGGG CACGCAATTT
GTGGGCCTCA GTGATTTCAC GGCGTTTCAG TCGGCTGTGC TGGCCAAAAC CGGTGCGGTC
ACGTGGGCGG GGCCTGCGCT GGGCGAAGAC TTTGGCACCG AGGTCCCTCC CGACGACATC
ATGGAAGCCT GTTTTGACGA CCTGATCACG GGTCAGGGCG AGGGCACCGG CTGGCAACTC
CCGAAATCCG CCATGAATTC AATAGCCGAC AACCCGGATT TGAAGGGGGC TGAAACTCAA
TTCAGCATCA AGAATGCCGT GCTGTGGGGA GGCAACCTGG CGATTTTGTC GTCCTTGGTG
GGAACGCCCT ACCTACCCAT CGTCAAGGGC GGTATTTTGT TTGTCGAAGA TGTTGGCGAG
CATCCCTACC GGGTGGAGCG CATGTTCACG CAACTGCTGT ATGCGGGTGT GCTGGCACAG
CAAAAGGCGG TCATTTTTGG GCAGTTCACC AATTACAGGC TGGTGCCGCA TGACAAGGGT
TTCAAATTAC CTTCGGTGGC AGCCTGGCTA CAGAGCCAGA TCAAGGCGCC GGTGCTGACC
GGACTGCCGT TTGGCCACGT GGCGACCAAG GTGCTGCTGC CCGTGGGCTA CAAAACAACG
TTGGCGGTGG AGGGCAGGGA TGCGTTTTTG CTGTGGGGCC ACCAGCATTA G
|
|---|
| Protein sequence | MKKHIYIYSP SSAVRDKASF KRGVRRLTAL GHEVEIDEAA LARHQRFAGD DETRLAAIHR
AAASGADVAL ITRGGYGLTR ILPGINYKAV AKAIDKGTQF VGLSDFTAFQ SAVLAKTGAV
TWAGPALGED FGTEVPPDDI MEACFDDLIT GQGEGTGWQL PKSAMNSIAD NPDLKGAETQ
FSIKNAVLWG GNLAILSSLV GTPYLPIVKG GILFVEDVGE HPYRVERMFT QLLYAGVLAQ
QKAVIFGQFT NYRLVPHDKG FKLPSVAAWL QSQIKAPVLT GLPFGHVATK VLLPVGYKTT
LAVEGRDAFL LWGHQH
|
|---|
| |