| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_2447 |
|---|
| Symbol | |
|---|
| ID | 4014908 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | + |
|---|
| Start bp | 2549439 |
|---|
| End bp | 2550824 |
|---|
| Gene Length | 1386 bp |
|---|
| Protein Length | 461 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637942112 |
|---|
| Product | CMP/dCMP deaminase, zinc-binding |
|---|
| Protein accession | YP_549264 |
|---|
| Protein GI | 91788312 |
|---|
| COG category | [F] Nucleotide transport and metabolism
[J] Translation, ribosomal structure and biogenesis
[R] General function prediction only |
|---|
| COG ID | [COG0590] Cytosine/adenosine deaminases
[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.683334 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACGACG CCTTCTTTAT GCAACTCGCG CTGGCGCAGG CCCGTGAAGC CGCAGCGGTG
GGGGAGGTAC CGGTGGGTGC TGTCGTGGTG CGACATGGCG AAGTCATTGC CACGGGTCGC
AACGCGCCGG TTGACGCGAA TGACCCGACG GCCCATGCCG AGATCGTCGC CCTTCGTGCG
GCAGCGCAGG CGCTGGGCAA CTACCGGCTG GATGAATGCG AACTGTTTGT CACGCTCGAA
CCCTGCGCCA TGTGCAGCGG CGCGATGCTG CACGCCCGGC TCCAGCGCGT GGTGTTCGGC
GCGACCGACC CCAAAACCGG TGCGGCCGGC TCGGTCATCA ACCTGTTTGC GGAATCCCGG
CTGAACCATC AAACCGGGTG GCAAGGTGGC GTATTGGCGG AGGAATGCGG CGAGTTGCTG
CAGGCGTTTT TTCGCCGGCG CCGGGCCGAC AAGCGCGAAA AGTTCCGGCT GAACCATCCG
CTGCGTGACG ATGCGCTGCG CACACCCGAT GCGGCTTTCG ATGATTTGCC GGGCTATCCG
TGGCCGCCCC GCTATGTCAG CGACCTCCCG GCGCTGGACG GGCTGCGCAT GCACTACCTT
GACGAAGGCG AGGGCGGGCC GGGAGGCCTG ACCTATTTGT GCTTGCACGG CAATCCCGCC
TGGAGTTACC TGTACCGGAA AATGATCCCG GTCTTTTTGC AGGCAGGCCA CCGGGTGGTC
GCGCCTGACC TGATTGGTTT TGGCAAAAGC GACAAACCCA AGAAGGACAG CTTTCACAGC
TTTGGCGTCC ATCGCCAGAT CCTCCTGGAA CTGGTGGATC GGCTAGACCT GCAAAACGTC
GTGCTCGTCG TACAGGACTG GGGCGGGTTG CTTGGCCTGA CATTGCCAAT GGTTGCTCCG
TTGCGCTACA AGGGCCTGCT GGTCATGAAC ACCATGCTGG CTACCAGTGA TGTGCCGTTG
TCACCTGGTT TCAGAGCCTG GCGCGAGATG TGCGCCAAAA ACCCGGATTT CGATGTGGCT
CGCCTTTTTG CCCGTGGCAA CCCGCAGATG AGTCCTGATG AATGCGCGGC CTACAACGCC
CCGTTCCCGG ACAAAGGCCA TCGTGCAGCG CTGCGCGCCT TTCCGCTGAT GGTGCCGGAA
TCTGAATGTG CCGATGGTGC CGCCATCTCC AGGGAGGCGC GCGAGTTTTG GCAGAGCCGC
TGGACAGGGC AGACCCTCAT GGCTGTCGGC GCCCAGGACC CGGTATTGGG CCTGCCGGTC
ATGCGTGCGT TGCAGGGCAT TATTCGCGGC TGTGACGCCC CTCTCGTGCT GGAGCAGGCC
GGGCACTTCG TGCAGGAGCA CGGGGAGCCG ATTGCCCGGC ATGCGGTCGG CTTCTTCAAA
CGGTGA
|
|---|
| Protein sequence | MDDAFFMQLA LAQAREAAAV GEVPVGAVVV RHGEVIATGR NAPVDANDPT AHAEIVALRA
AAQALGNYRL DECELFVTLE PCAMCSGAML HARLQRVVFG ATDPKTGAAG SVINLFAESR
LNHQTGWQGG VLAEECGELL QAFFRRRRAD KREKFRLNHP LRDDALRTPD AAFDDLPGYP
WPPRYVSDLP ALDGLRMHYL DEGEGGPGGL TYLCLHGNPA WSYLYRKMIP VFLQAGHRVV
APDLIGFGKS DKPKKDSFHS FGVHRQILLE LVDRLDLQNV VLVVQDWGGL LGLTLPMVAP
LRYKGLLVMN TMLATSDVPL SPGFRAWREM CAKNPDFDVA RLFARGNPQM SPDECAAYNA
PFPDKGHRAA LRAFPLMVPE SECADGAAIS REAREFWQSR WTGQTLMAVG AQDPVLGLPV
MRALQGIIRG CDAPLVLEQA GHFVQEHGEP IARHAVGFFK R
|
|---|
| |