| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_2442 |
|---|
| Symbol | |
|---|
| ID | 4014903 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | + |
|---|
| Start bp | 2545756 |
|---|
| End bp | 2546346 |
|---|
| Gene Length | 591 bp |
|---|
| Protein Length | 196 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637942107 |
|---|
| Product | 2',5' RNA ligase |
|---|
| Protein accession | YP_549259 |
|---|
| Protein GI | 91788307 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1514] 2'-5' RNA ligase |
|---|
| TIGRFAM ID | [TIGR02258] 2'-5' RNA ligase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.900073 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGAGC AACCGTCATT ACCCGGGTTC GCCGCCTTGC CGCAGCAGCC GACGGACAGG
CTGTTCTTTG CCATCTTTCC CGACGCGAAC GCCTCGGTGC GCATCGCAGC GCTTGCGCAG
CAGCTGCGTG GCGAGCATGA ATTGCATGGC CGGCCGCTCG CGCGGGAGCG TTTCCATGTC
ACGTTGCATC ACCTTGGCGA CTACGTGGGT GTGCCGCGTG ACGTTGTCGC CATGGCGGAC
AAAGCGGCAA TGGCCGTCAC CACCATGGCG CCGTTCGAGG TCGCGTTCGA CCGCGCGGCG
AGCTTCTCCA GCGCTCCGCG CAACCGGCCC TTCGTTCTGC GCGGGGGCGA TGGCGTCGCC
GCATTGATGG AGTTCCAGCA GGCGCTGGGG ATGGCGATGA AGCAGGCCGG GCTCGGGCGC
TGGGCCAAAC CGGGCTACAC GCCGCACGTG ACCTTGCTTT ACGATGACCG CTGTGTCGCC
GAGCAGGCCG TCGAGACGAT CAACTGGACC GCGCGCGAGT TCGTCCTCGT GCACAGCCTG
CTCGGTAAAA CCCGGCATGT GGCCCTCGCA CGCTGGCCGT TGCACGGCTG A
|
|---|
| Protein sequence | MPEQPSLPGF AALPQQPTDR LFFAIFPDAN ASVRIAALAQ QLRGEHELHG RPLARERFHV
TLHHLGDYVG VPRDVVAMAD KAAMAVTTMA PFEVAFDRAA SFSSAPRNRP FVLRGGDGVA
ALMEFQQALG MAMKQAGLGR WAKPGYTPHV TLLYDDRCVA EQAVETINWT AREFVLVHSL
LGKTRHVALA RWPLHG
|
|---|
| |