| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_2434 |
|---|
| Symbol | |
|---|
| ID | 4014895 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | - |
|---|
| Start bp | 2537155 |
|---|
| End bp | 2538855 |
|---|
| Gene Length | 1701 bp |
|---|
| Protein Length | 566 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637942099 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_549251 |
|---|
| Protein GI | 91788299 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.759622 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACACTT TTTCGGTTAC CCATGCATGT CGCCGGCTAT TCGGTGCTAT CGCCGGCGTG
CTCATTGCTG TGGCGCTGGG AATAACGCCG GCGCATGCAG TTCTGAGTGA TGGCTTCTTT
GAGCTGGACG GTAACACCAT CGATCCGTCA GGCGCTAGTC TGCCGGACGA CTGGAACAGC
TTTCCTGCCG GTCAGGGACA CACGACGCGA ATTACCAACC CTGACCTGAG TGGAGGCCCA
TACCTCGGAA TCATCAGCGA TACCAATCCG GCGGTGTTCC GCGGCGGCTC CAAGGATATA
CAGGACATTA GCGCCTGGCG CTATGACTTG GGCTCCTCGC CACCCAAAGA CGATATGCTC
CACGCCTACG CGGCAGCCTA TACCGCCACC ACCACCACCG CCACTACCAC GGCCGGCGAT
CTGCTGATTT ACTTCGGCGC TGACCGCGCC AGTTTTAATG GCACGGCGAG CCTGGGCTTC
TGGTTCTTCA AAAATCCGGT GGCAAGGAAT GACGCGACAG GAACCTTTAT CAACCCCGTC
ACCAACGGGC CAGCGACGCA TGCGGAAGGA GATGTACTGC TGGCTTTTGA ATACACCAAT
GGCGGCGCTG TGACCGATGT GCATTGGTAT AAGTGGACCG CAGGTCATCT GCAGGATATG
GGAACGATTG GGGTCTCGGC GACCTCCGTT GCCGGGGTGT TCTGCGATGC GGACGACAAG
CTTTGCGGCT CCACCAACGG CGGAGCTTTG ACCATTCCCT GGAACGGGGT GATACAGGCG
GGGCAGTTCT TCGAAGGCGG TGTGAATATC CAGAAACTGT TGCCAGGCAG CGACTCCTGC
TTTTCTTCGT TCATGGCAAC CAGCCGGTCG TCGGATCAGC CCAATGCATC GATCAAGAAC
TTTCTCCTGT CGAGCTTCCC GGTGTGCCAT TTGACAGTGA CGAAGGCGTG CGAGAGCGCT
GCGTACCAAT CGGCTACCAA TACGATATTG AATACCGTCA GAGGCAGTAT CGTGAATGAT
GGCGGCGGCC CCCTGACGAA CGTCACGCTG ACCGACAACC CCACGTTCGA TGCAGGCACC
TTTGGATTCT TCACCTGCGA CGCCAATGGT TTGCCGACCG CAACACCCCA GGATCCCGCC
ACGCTGGCAT CCGGTGCTTC GATATGCTAC CGGGGAAAAT ACACTTCCAA TACCCTGTCA
ACACTTGACA CGGTGACCGC AAGTGCATCG ACTGGTTCTG GCTCGGTGTC GGGCACGGCA
AGTGCCACTT GCACCGCAAC GCCTCCCAAC GCAGGCCTGT CCGTGACGAA GATCTGCGAC
GTGGATCTGG AGCTTGTGAG CGGCAAGCTG GCGCTGAAGG TCAACTACAG TGGCTCAGTG
ACCAATAGCG GCGGCCTTGC CTTGACCGGG GTGGAGGTTT GCGAGGCTCA TGAGCAGACC
TACACAGGGA CTCAAACGCC GTGCGATGTT ACCCACACCA CGATTTCCAT CGGCAACCTG
GCTGCAAGTG CGTCGGCCCC TTACAGTGGG TCTTACTACC CAACGCAGGC ATTGACAGCG
GGAGGCCTGT CGACACTGGC CGATCCGGAA CTGTCCCTGT TCAAGGACCA GGTTATGGCC
CGTGGAACCA AGCCGGCAAT TGTTGGCGGA GGCATAGAAA ACTCACTGCC AAACGAGGCC
ACATGCCCGC TGTGCAAGTA A
|
|---|
| Protein sequence | MNTFSVTHAC RRLFGAIAGV LIAVALGITP AHAVLSDGFF ELDGNTIDPS GASLPDDWNS
FPAGQGHTTR ITNPDLSGGP YLGIISDTNP AVFRGGSKDI QDISAWRYDL GSSPPKDDML
HAYAAAYTAT TTTATTTAGD LLIYFGADRA SFNGTASLGF WFFKNPVARN DATGTFINPV
TNGPATHAEG DVLLAFEYTN GGAVTDVHWY KWTAGHLQDM GTIGVSATSV AGVFCDADDK
LCGSTNGGAL TIPWNGVIQA GQFFEGGVNI QKLLPGSDSC FSSFMATSRS SDQPNASIKN
FLLSSFPVCH LTVTKACESA AYQSATNTIL NTVRGSIVND GGGPLTNVTL TDNPTFDAGT
FGFFTCDANG LPTATPQDPA TLASGASICY RGKYTSNTLS TLDTVTASAS TGSGSVSGTA
SATCTATPPN AGLSVTKICD VDLELVSGKL ALKVNYSGSV TNSGGLALTG VEVCEAHEQT
YTGTQTPCDV THTTISIGNL AASASAPYSG SYYPTQALTA GGLSTLADPE LSLFKDQVMA
RGTKPAIVGG GIENSLPNEA TCPLCK
|
|---|
| |