Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_2428 |
Symbol | truB |
ID | 4014927 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | + |
Start bp | 2530305 |
End bp | 2531318 |
Gene Length | 1014 bp |
Protein Length | 337 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637942093 |
Product | tRNA pseudouridine synthase B |
Protein accession | YP_549245 |
Protein GI | 91788293 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0130] Pseudouridine synthase |
TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.36134 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCAAA CCTCTACTCA TCGCCAGAAG ATTCAGCGAC GTCCCGTGCA CGGCGTGCTG CTGCTCGACA AGCCGCTGGG CCTGTCGAGC AACCAGGCGC TGCAAAAAGC CAAATGGCTG TTGCGCGCCG ACAAGGCCGG GCATACCGGT ACGCTGGATC CGCTGGCCAC TGGCGTGCTG CCGCTGTGCT TTGGGGCGGC GACCAAATTC AGCCAGATCC AGTTGGACGC CGACAAGACG TATGAAGCCG TGCTCCTGCT GGGCCGGAAA ACCACGACGG CTGATGCCGA GGGCGACGTC ATCGAGACGC GCCCCGTTCC CGAGATCACC CCCGAACTGC TGGCAACCCT GACCCGGCGT TTTACCGGCC CGCTGGCGCA GATTCCGCCC ATGTATTCCG CGCTCAAGAA AGACGGCAAG GCACTGTACG AATACGCGCG CAAAGGCGAA GACGTGGAGC GGGAAGCGCG CCACATCACG ATTTACAAGC TGGATATGGC TCTGACCCAT GACGAGCGGG CGCCGGCAGC TATCAAAATC ACCGTGACCT GCAGCAAGGG CACCTACATT CGCACGCTTG GTGAAGACAT CGGCGAGGCG ATCGGTTGCG GCGCTCACCT CGGGTCCCTG AGGCGGCTGG AGACCGGCGG CTATGTCGCT TCGCAGTGCG TGGGCCTGCC GGCGCTGGAA GCCATGAGCG AGCAGCAGCG CGAAGCCTGC CTGCTGCCAG TTCAATCACT CGTCGCCAAC TATCCGGTTG TCACACTCGA TGCCGATAAT GCAGGGCGCT TTTTGAGCGG CCTGCGCCGT CGCGGCAGCC CCGGCCAATG GGGTCCGGAC GCGGTGCTGG TGCAGGTGTA CGGTAGCGAC CCGGCGGCTT TTCTCGGCTC GGCCCATGTC ATGGCTGACG AGTTGATTCC GGGGCGCCTG CTCAGCCCGA TTGAAATCCA GGACATGCTG GCCCCGCGTC CGCCTGTTAT TTCCAACCCT GCGGCAAGCG CCGCAACGGC TTAG
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Protein sequence | MTQTSTHRQK IQRRPVHGVL LLDKPLGLSS NQALQKAKWL LRADKAGHTG TLDPLATGVL PLCFGAATKF SQIQLDADKT YEAVLLLGRK TTTADAEGDV IETRPVPEIT PELLATLTRR FTGPLAQIPP MYSALKKDGK ALYEYARKGE DVEREARHIT IYKLDMALTH DERAPAAIKI TVTCSKGTYI RTLGEDIGEA IGCGAHLGSL RRLETGGYVA SQCVGLPALE AMSEQQREAC LLPVQSLVAN YPVVTLDADN AGRFLSGLRR RGSPGQWGPD AVLVQVYGSD PAAFLGSAHV MADELIPGRL LSPIEIQDML APRPPVISNP AASAATA
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