| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_2425 |
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| Symbol | |
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| ID | 4014924 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 2525312 |
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| End bp | 2526832 |
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| Gene Length | 1521 bp |
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| Protein Length | 506 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637942090 |
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| Product | NusA antitermination factor |
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| Protein accession | YP_549242 |
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| Protein GI | 91788290 |
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| COG category | [K] Transcription |
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| COG ID | [COG0195] Transcription elongation factor |
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| TIGRFAM ID | [TIGR01953] transcription termination factor NusA
[TIGR01954] transcription termination factor NusA, C-terminal duplication |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000562867 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCGCG AACTGTTGAT GTTGGTTGAT GCCATCTCGC GTGAGAAAAA TGTTGAACGT
GACGTCGTTT TTGGGGCTGT CGAGCTTGCG CTCGCCTCGG CCACCAAGAA GGTGTACGAA
GACGGCGTGG ACATCCGCGT GGTGGTAGAC CGTGACAGCG GCAATTACGA GACTTTCCGC
CGCTGGCTGG TGGTGCCTGA TGAAGCCGGC CTGCAAAATC CGGAAGCCGA AGAGCTGGTG
AGCGACGCTC GCGAAGAAAT TCCCGACATT GAAGAAGGCG ACTACATCGA AAAACCGGTG
GAGAGTCTGC CTATCGGTCG CATCGGCGCA CAAGCCGCCA AGCAGGTCAT CCTGCAAAAA
ATCCGCGATG CCGAGCGCGA AATGCTGCTC AACGACTTCA TGTCGCGCGG CGACAAGATT
TTTGTCGGCA CCGTCAAGCG CATGGACAAG GGCGACATCA TTGTCGAATC TGGCCGTGTC
GAGGGGCGGC TGCGTCGCAG CGACATGATC CCCAAGGAAA ATCTGCGTGC CGGAGACCGC
GTCCGCGCCA TGATCATGGA GGTCGACACC ACCCTGCGCG GTGCCCCCAT CATCCTGTCG
CGCACCGCCC CAGAGTACAT GATCGAGCTG TTCCGCCAGG AAGTGCCCGA GATCGAGCAG
GGCCTGCTAG AGATCAAGTC CTGCGCCCGT GACCCCGGTT CGCGCGCCAA GATCGCCGTG
TTGTCGCACG ACAAGCGGGT GGATCCCATC GGCACTTGTG TCGGGGTTCG CGGCACCCGT
GTCAATGGCG TGACCAATGA GCTCGCCGGC GAACGCGTCG ATATCGTGCT GTGGAGCGAA
GACCCGGCCC AGTTCGTGAT TGGCGCACTG GCGCCTGCCA ATGTGTCATC CATCGTGGTG
GACGAAGAGC GCCACGCCAT GGACGTCGTG GTCGACGAAG AAAACCTGGC CATTTCGATC
GGCCGCGGTG GCCAGAACGT GCGCCTGGCT GCAGAGCTGA CCGGCTGGAA GATCAACATC
ATGACGGCCG ACGAGTCGGC CCAGAAGCAG GCGACCGAAA CCGATACCAG CCGCAAGCTC
TTCATGGAAA AGCTTGATGT GGACGAGGAA ATCGCCGACA TCCTGATCTC CGAAGGCTTC
ACCAGCCTGG AAGAAGTCGC GTATGTGCCG CTGCAGGAAA TGCTCGAGAT CGAATCGTTT
GATGAAGACA CGGTCAATGA GTTGCGCACC CGCGCCAAAG ATGCACTGTT GACGATGGAA
ATCGCCAAGG AAGAAAATGC CGAAGGTGTT TCGCAGAACC TGCGTGACGT TGAAGGCATT
ACGCCCGAGC TGATCGCCAA ACTTACCGAA GCGGGTGTCC ATACCCGCGA CGACCTGGCC
GATCTGGCTG TGGACGAACT CACCGATATC ACCGGCCAGT CTGCGGACGA AGCCAAGGCC
CTGATCATGA CTGCTCGCGC CCATTGGTTT ACCAATGACG CAAGTGACAC CGCTGCACCT
GCAACGGCCC AAGAGCAATG A
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| Protein sequence | MNRELLMLVD AISREKNVER DVVFGAVELA LASATKKVYE DGVDIRVVVD RDSGNYETFR
RWLVVPDEAG LQNPEAEELV SDAREEIPDI EEGDYIEKPV ESLPIGRIGA QAAKQVILQK
IRDAEREMLL NDFMSRGDKI FVGTVKRMDK GDIIVESGRV EGRLRRSDMI PKENLRAGDR
VRAMIMEVDT TLRGAPIILS RTAPEYMIEL FRQEVPEIEQ GLLEIKSCAR DPGSRAKIAV
LSHDKRVDPI GTCVGVRGTR VNGVTNELAG ERVDIVLWSE DPAQFVIGAL APANVSSIVV
DEERHAMDVV VDEENLAISI GRGGQNVRLA AELTGWKINI MTADESAQKQ ATETDTSRKL
FMEKLDVDEE IADILISEGF TSLEEVAYVP LQEMLEIESF DEDTVNELRT RAKDALLTME
IAKEENAEGV SQNLRDVEGI TPELIAKLTE AGVHTRDDLA DLAVDELTDI TGQSADEAKA
LIMTARAHWF TNDASDTAAP ATAQEQ
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