| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_2423 |
|---|
| Symbol | |
|---|
| ID | 4014922 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | + |
|---|
| Start bp | 2522512 |
|---|
| End bp | 2524203 |
|---|
| Gene Length | 1692 bp |
|---|
| Protein Length | 563 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637942088 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_549240 |
|---|
| Protein GI | 91788288 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4172] ABC-type uncharacterized transport system, duplicated ATPase component |
|---|
| TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.00102758 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCCCA CGCCTGTCAC TGTGCATCCA GCGCTGCCGC CCGATGGGGG CTTCGCGACG
GGTGGCGGAT CTTCCGCGCC TGCCCATCCG CTGCTGAAAG TCGACGGCCT CAGCGTTTCC
TTTGCCGGCA AAAGAGTCGT GCATGGAATT GATTTTTCCA TCGCACCCGG AGAAAAACTG
GCCCTGGTAG GCGAGTCCGG TTCGGGCAAG ACGGTGACGG CCCTGAGCCT GCTGCGGCTG
GTGCAAAACG CCAGCATCAG CGGGCAGGCC CGGTTTGCCG CAACAGAGGG CCTGCAAGGG
CCGGTGAATC TGCTTTCCCT TCCTGAAGCC GAGTTGCGCG GCATTCGCGG CCGGGATATT
GCGATGATCT TCCAGGAGCC GATGACGGCC CTGAATCCCC TGTTCAACGT TGGGGACCAG
ATTGCCGAGG TTGTCCAGCT AAAACGCGGC CTGACCCCTG CAGAGTCTGT GACGATGGCA
ATTAAATTGC TGGCAGACAC CGGCATTCCG GAGCCTGACA GGCGGGCGCG CTCATTTCCC
CATCAGCTCT CTGGTGGGCA ACGCCAGCGG GCCATGATTG CGATGGCGCT GGCCTGCCAG
CCCAAGCTGC TGCTGGCTGA CGAGCCGACA ACCGCACTGG ACGTCACCTT GCGCGGCCAG
ATTCTGGACC TGCTCAGCGA GTTGCAGCAG CGAAACGGCA TGGCGGTGCT CCTGATCACG
CACGACCTCA ACCTCGTCCG CCGCTTTGCG GACCGGGTGG CGGTGATGGA AAACGGATAT
CTGGTGGAGC AGGGCACCGT CGCGGAGGTG TTTGCCGATC CGCAGCACGC CTACACCCGT
AAATTGATCG ACAGCAAGCC GGTGCGCAAT GTGAGCGAGG GCGTGGACTT CGGGCCGGGC
GGGCCTTTGA TGATGCAGGC CAGTCGTGTC TCCGTGACCT ATCCGGTCGC CATTCCGGGT
TTCAGGGGCT GGTTCAAAAG CGGTGGGTTT GTGGCTGTAA AGGATGCCAC CTTCGATATT
CCACCCGGTC AGACGCTGGG GGTCATCGGG GAATCGGGTT CCGGCAAGTC AACTCTGGCC
CTCGCCAGCC TCGGCCTGCT GCCGTTTTCC GGTACCTTGC AGGCGGCAGG GCAGTCCTGG
AGCCGTAATG GCGCCAGCAA CAAGGCGATT CGCCGTGCGG TTCAGGTGGT TTTTCAGGAC
CCGTTTTCCT CCCTTTCACC GCGCATGACG GTGGGCGAGA TCGTGGAGGA AGGCTTGCGT
GTCCATGAGC CCTCGCTGGA CGAGCTCGAA ATGCGGGAGC GGGCGTCGCA AGCTCTGGCG
GACGTGGGCA TGAGCGAGGC GCAGTTTCCG GGCTTGCTGC AACGGTATCC GCATGAGTTC
TCGGGCGGGC AGCGGCAGCG GGTGGCCATT GCACGGGCGC TGATCATCCA TCCCGGCTTG
CTGGTGCTGG ACGAGCCGAC CAGCGCGCTC GATGTGACGA TCCAGAAGCA GGTTTTGTCG
CTGCTTCAGC GGCTGCAGCG CGAACGGGGC TTGAGCTATC TTTTGATCAC GCATGACGTG
GACGTGATCC GTGCGATGGC CCATCAGGTG ATGGTGATGA AAGACGGTGA GGTGCTGGAA
TCCGGCGCGG TGCTGGACGT TCTGGACAGG CCCCATCATC CCTACACGCA GGTATTGGTG
TCGCAGGCCT GA
|
|---|
| Protein sequence | MTPTPVTVHP ALPPDGGFAT GGGSSAPAHP LLKVDGLSVS FAGKRVVHGI DFSIAPGEKL
ALVGESGSGK TVTALSLLRL VQNASISGQA RFAATEGLQG PVNLLSLPEA ELRGIRGRDI
AMIFQEPMTA LNPLFNVGDQ IAEVVQLKRG LTPAESVTMA IKLLADTGIP EPDRRARSFP
HQLSGGQRQR AMIAMALACQ PKLLLADEPT TALDVTLRGQ ILDLLSELQQ RNGMAVLLIT
HDLNLVRRFA DRVAVMENGY LVEQGTVAEV FADPQHAYTR KLIDSKPVRN VSEGVDFGPG
GPLMMQASRV SVTYPVAIPG FRGWFKSGGF VAVKDATFDI PPGQTLGVIG ESGSGKSTLA
LASLGLLPFS GTLQAAGQSW SRNGASNKAI RRAVQVVFQD PFSSLSPRMT VGEIVEEGLR
VHEPSLDELE MRERASQALA DVGMSEAQFP GLLQRYPHEF SGGQRQRVAI ARALIIHPGL
LVLDEPTSAL DVTIQKQVLS LLQRLQRERG LSYLLITHDV DVIRAMAHQV MVMKDGEVLE
SGAVLDVLDR PHHPYTQVLV SQA
|
|---|
| |