Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_2399 |
Symbol | |
ID | 4014935 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | + |
Start bp | 2495094 |
End bp | 2499302 |
Gene Length | 4209 bp |
Protein Length | 1402 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637942064 |
Product | ATP-dependent helicase HrpA |
Protein accession | YP_549217 |
Protein GI | 91788265 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1643] HrpA-like helicases |
TIGRFAM ID | [TIGR01967] ATP-dependent helicase HrpA |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGCAGCTT TGACTGCTGA CTCTTTCTTG CCGCTTTCCC CGTCTCCCTC CTTGATCCCC CTGGCCATTA CCTTTCCCGA GTCGCTGCCG GTCTCCGGCA AGCGCGATGA CATCACCGCT GCGCTTCAGG CGCACCAGGT GATCATCGTT TGCGGCGAAA CCGGCTCGGG CAAAACCACC CAGCTGCCCA AGATCGCACT GGCCATGGGC CGGGGCAAGC TCAATTACCC GGCGGGCCAG GGAAAACTGA TCGGCCACAC CCAGCCGCGC CGCATCGCTG CCTCCAGCGT GGCCAAGCGG ATTGCCGAAG AGCTGAAAAC ACCACTGGGC GAGGTGGTGG GTTACAAGGT GCGCTTTCAG GACCGGCTGA GCCGTGATGC GTCAGTCAAG CTGATGACCG ACGGCATCCT GCTGGCCGAG ACGCAGACCG ATCCGCTGCT CAGGGCCTAC GACACCCTCA TCATTGACGA GGCGCACGAG CGCAGCCTGA ACATCGATTT TTTGCTGGGC TATTTGCGCC AGCTGCTGCC GCGCCGGCCC GACCTGAAGG TGATCATCAC CTCGGCCACC ATTGATGCGC AGCGTTTTGC TGACTATTTC GCGTCAAGCG CGCCGGCGCC GGGCCGCCCC AAGCCGGGCG CAGCCCCTGA GGGGCTGGAG CCTGTGGCTC CAAGCCAGCT TGAGCAGGAT TGGACAGGCG ACAGAGGCGA CGCGTCTCGC GAGCCGCGGC CTGCAAGGCC TCGCGACGAC GCGCAGCGCG GAGCGTGGGG GCCAAAGATT CCCGCGCCCG TCATCATGGT GTCCGGCCGG ATGTTTCCGG TCGAGCAGCG CTACCGGCCC TTTGAGGAGT CGCGTGACTA TGACTTGAAC GACGCGATCG CCGACGGCGT TGATGAACTC TGGCAAAACC CGCACAGCGC GGGCGACATC CTGGTGTTTC TGCCGGGCGA GCGCGAGATC CGCGAAGCTG CCGACCATTT GCGCAAGCAT CTTGCCCACC AGCCACTGAC CCGCAACGCC GAAGTGCTGC CGCTGTTTGC GCGCCTGAGC CAGGCCGAGC AGGACCGGAT TTTTGACGGA CACACCGGCC GGCGCATTGT GCTGGCCACC AACGTTGCGG AGACCTCGCT CACGGTTCCG GGTATCCGGT ACGTCATTGA CGCAGGCACG GCGCGCGTCA AGCGCTACAG TTTCAGGAGC AAGGTGGAGC AACTCATGGT GGAGCCGGTG TCGCAGGCGG CGGCCAACCA GCGCGCCGGG CGTTGCGGCC GGGTGGCGGA CGGCATTTGC ATACGTCTCT ACGATGAGCA GGATTTTGTG GGCCGGTCCC GCTTTACCGA CCCTGAAATC CTGCGCAGTT CACTGGCGGC GGTGATTTTG CGCATGAAGG CGCTGCACCT GGGCGCGGTG GAAGACTTTG CCTTCATCGA GCCGCCGCAG CGACGCGCCA TAGCCGACGG TTACCAGTTG CTGGCCGAAC TGGGTGCCGT GGACGATGAC AACGAACTGA CGCCGGTGGG CCGCACGCTG GCCAAGCTGC CGCTGGATCC GCGCGTGGGC CGCATGATCC TGGAGGCGAA GGACCGGCAG GCGCTGGACG AAGTGCTGGT AATTGCCAGT GCCCTGAGCG TGCAGGATGT GCGCGACCGG CCCATGGACA GGCAGGCACA GGCCGACCAG GCGCACGCCA AGTTTGACGA CGAGAAAAGC GAATTCAGCG GTTATTTGAA GCTCTGGAAA TGGCTGGGTG ATTCGCGGGG AGGCAGGCCC TCACCCCAAC CCTCTCCCAA AGGGCGAGGG GGTAAAACCG AATTACTCCC TCTCCCCCTG GGAGAGGGCA GGGGTGAGGG CTCCCCGGTC CACAAAATTT CCAACCGCCA GTACGAAACC CTGCTCCGCG AAAACTACGT CAACGTCCGC CGCGTGCGCG AGTGGCGCGA CATTCATTCG CAACTGCACA GCGTGGTGGG TGAACAGGGC TGGCACCTGA ATGAGCGGCC CGCCAGTTAC GAGCAGCTGC ATTTGTCCAT GCTCTGCGGC CTGCTGGGCA ACATTGGGTG CAAGAGCGAC GAGGAAGACT GGTACCTGGG CGCGCGCGGC ATCCGGTTTT ATCGGCACCC CGGCGCCAAG CTCAGTAAAA AACCGGGCCG CTGGATTGTG GCGGCCGAAC TGGTGGAAAC CACGCGGCTG TTTGGCCGCG GCATCGCCAA CATCGAGCCG CAGTGGATAG AGCAGGTGGC CGGCCATCTC TTGAAGAAGC AGCTGCTGGA CCCGCACTGG GAAAAGAAGG CTGCACAGGT GACCGCGCTG GAGCGTGCGA CGCTTTACGG ACTGGTGGTT TACAACGGCC GGCGGGTCAA TTTTGGCCGC GTTGACCCGG TGTCGGCGCG TGAAATTTTC ATCCGCGAAG CGCTGGTCGC GGGCAACTGG GACACAAAGT TGACCTTCCT GGCGGCCAAC CTCAGGCTGG TCCAGCAAGT GCAGGACCTG GAGCACAAGG CGCGCCGGCA GGACGTGCTG GTGGACGAAG AGCTGATTTA CGCTTTTTAT GACCAGCAGC TGCCTGCCGA CGTGTGCAGC GGCGCGAGCT GCGAGAGCTG GTACAAGGAC GAGGTCAAAA AGCAACCCAA ACTGTTGCTG CTCACGCGAG AGGAGTTGAT GCGCCACGAA GCGGCAGGCA TCACGACACA GGCCTTTCCC AAAACCCTGC GTCTGGGCGG TGTGGACTGC ATGGTCACTT ATCTGCATGA GCCGGGTGAC CCCAAAGACG GCGTGACGGT AGACGTACCG CTGTTTGCGC TCAACCAGGT CAATGAAGAG CGCTGCGAGT GGCTGGTTCC CGGCATGCTC AAGGACAAGG TGCAGGCGCT CATCAAGACC CTGCACCAGC GCCCGCGCTC ACGTCTGGTG CCGCTGCCCG AGACCGCTGC GCGCATGGCG GGGCAGCTGC TGCAGCCCGA AGTGTTTGGC AGTGGATCGC TCACGGATGC GATCCTGAAG CTGGTGCGCG ACGCGACCTC GCTCGACATC AAGCGCGCAG ACATGAAGCT GGACATGCTG CCCGCCCATC TTTTCATGAA CTTCCGGGTC ATTGACGAGC ATGGCCGGCA ACTGGGCGCA GGCCGCAACC TGGGCGCGCT CAAAGGTGAG TTGGGCCCGC AGGCGCGCGG CGCGTTTCAG GCGCTGGCCG GGCTCAAGAA TCTGGCCAGG CCTGCTGCTT CAGCGCCCAA TGAAGAATCA GATCGACCTT CAGCTCAAGT GCCTACTGGG CAAGCGGCTA TCAAAAATGT AGCCAAAGGA AGTACCCAAT CCGAGAGCCA TCCCGTCAAA GTGGCGGAGC GCTACACCAG CTGGAGCTTT GGCGAGCTGC CGGAACTTAT GGAAATCCGC AAGGGAAGCC AGACATTGAT CGGTTTTCCG GCCCTCATCG ACCTTGGGGA TGCCGTGACC ATCGAGGTGT TTGACGAACC CGACCTGGCC GCGGTCAAAC ACCGCGCCGG CTTGCGGCGC CTGTTCTCGC TGCAGATCAA GGACGCACTC AAGTACCTCG AAAAGAACCT GCCCGATTTG CAGAAAATGG CCACGGCCTA CATGCTGGTC GGGCGTGCCG CCGACAACTC CGGCGGCGGA ACGCTGGAGG AGCTGCGTGC GCAAATCATC GAGGTGGCGC TGGACCGGGC GTTTTTGCTC GATCCCTTGC CGACGGGCGA GGCTGATTTC AAGCGACGGG TGGACGACGG GCGAGGGCGC CTGACCTTGA TCGCCAGCGA AGTGGCACGG CTGGCGGCCG GCATTCTGAC CGAATACGCC GTGGCCCAGC GCAAGATCAA GGACACCAAA AATGCGGCGG AGGCTGTGGC CGATGCCAGC CAGCAGCTGC AGCGCCTGAT GCCCAAACGC TTTTTGACCA CCACACCCTA CCCGCAGCTG CAGCACTTTG TTCGCTACCT GAAGGCGATC ACGTTGCGCC TGGAGAAATG GCGAGCCGAC CCGGCACGTG ACGCAGCGCG GCTGGCCGAG TTGCGCCCGC AGGAGCAGCG CTACTGGCGC CTGGTGGCCG AGCGCAAAGG CGCTACCGAT GCACGCATGC AGGAGTTTCG CTGGCTGCTG GAGGAGTTGC GCGTGAGCTT CTTCGCACAG GAGCTGCGCA CGCCACAACC GGTGAGCGTG AAACGGCTGG ACAAGGCCTG GCAGCAACTG AATGGTTGA
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Protein sequence | MAALTADSFL PLSPSPSLIP LAITFPESLP VSGKRDDITA ALQAHQVIIV CGETGSGKTT QLPKIALAMG RGKLNYPAGQ GKLIGHTQPR RIAASSVAKR IAEELKTPLG EVVGYKVRFQ DRLSRDASVK LMTDGILLAE TQTDPLLRAY DTLIIDEAHE RSLNIDFLLG YLRQLLPRRP DLKVIITSAT IDAQRFADYF ASSAPAPGRP KPGAAPEGLE PVAPSQLEQD WTGDRGDASR EPRPARPRDD AQRGAWGPKI PAPVIMVSGR MFPVEQRYRP FEESRDYDLN DAIADGVDEL WQNPHSAGDI LVFLPGEREI REAADHLRKH LAHQPLTRNA EVLPLFARLS QAEQDRIFDG HTGRRIVLAT NVAETSLTVP GIRYVIDAGT ARVKRYSFRS KVEQLMVEPV SQAAANQRAG RCGRVADGIC IRLYDEQDFV GRSRFTDPEI LRSSLAAVIL RMKALHLGAV EDFAFIEPPQ RRAIADGYQL LAELGAVDDD NELTPVGRTL AKLPLDPRVG RMILEAKDRQ ALDEVLVIAS ALSVQDVRDR PMDRQAQADQ AHAKFDDEKS EFSGYLKLWK WLGDSRGGRP SPQPSPKGRG GKTELLPLPL GEGRGEGSPV HKISNRQYET LLRENYVNVR RVREWRDIHS QLHSVVGEQG WHLNERPASY EQLHLSMLCG LLGNIGCKSD EEDWYLGARG IRFYRHPGAK LSKKPGRWIV AAELVETTRL FGRGIANIEP QWIEQVAGHL LKKQLLDPHW EKKAAQVTAL ERATLYGLVV YNGRRVNFGR VDPVSAREIF IREALVAGNW DTKLTFLAAN LRLVQQVQDL EHKARRQDVL VDEELIYAFY DQQLPADVCS GASCESWYKD EVKKQPKLLL LTREELMRHE AAGITTQAFP KTLRLGGVDC MVTYLHEPGD PKDGVTVDVP LFALNQVNEE RCEWLVPGML KDKVQALIKT LHQRPRSRLV PLPETAARMA GQLLQPEVFG SGSLTDAILK LVRDATSLDI KRADMKLDML PAHLFMNFRV IDEHGRQLGA GRNLGALKGE LGPQARGAFQ ALAGLKNLAR PAASAPNEES DRPSAQVPTG QAAIKNVAKG STQSESHPVK VAERYTSWSF GELPELMEIR KGSQTLIGFP ALIDLGDAVT IEVFDEPDLA AVKHRAGLRR LFSLQIKDAL KYLEKNLPDL QKMATAYMLV GRAADNSGGG TLEELRAQII EVALDRAFLL DPLPTGEADF KRRVDDGRGR LTLIASEVAR LAAGILTEYA VAQRKIKDTK NAAEAVADAS QQLQRLMPKR FLTTTPYPQL QHFVRYLKAI TLRLEKWRAD PARDAARLAE LRPQEQRYWR LVAERKGATD ARMQEFRWLL EELRVSFFAQ ELRTPQPVSV KRLDKAWQQL NG
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