| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_2388 |
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| Symbol | |
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| ID | 4014963 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 2480304 |
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| End bp | 2483510 |
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| Gene Length | 3207 bp |
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| Protein Length | 1068 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637942054 |
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| Product | DNA polymerase III, alpha subunit |
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| Protein accession | YP_549207 |
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| Protein GI | 91788255 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.743991 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCTCCT ACGTGCTGCC CGATTACGCC GAACTACATG CGCTGAGCAA TTTCAGCTTT
CAGCGCGGCG CCTCGCATGC TCAGGAGCTG GCCGAGCGGG CTTTCAAACT GGGCTACAAG
GCGCTGGCCA TCACTGACGA ATGTTCGGTG GCCGGTGTGG TGAGGGCGCA TGAAGTGACC
CGGGAGCTCG GTCTGCAGTT GCTGCCGGGG GCCGAGTTCC TGGTGCAGGC CGCTAATGCG
TTCCGGCTGG TGGTGCTGCC CCACAACGCC GCGGGCTGGG GCAACCTGTG CGAATTCATC
ACCGAAGCAC GCCGCGCCGG TGACGAGGTG GACAAAGGCA GCTACCGCGT CGTGCTGGGC
GAGACCGATT TCTCGCGGCT GGCCGATTGC GAAATCCTGC TGTCGCCCTT GCCCGATGCC
ATCCACACGC AAGCGCTTTG CGCGCATGCC GAATGGGCGA CAGGGCTGTT TGGCCCGAAT
GCCTGGCTGG CCGTCGAACT GCTGCAAGGC CTGGACGACG CGCTGCGCCT GCAGCAGCTG
CAGGAGGTTG CCGGGCACAC CGGCATACGC CTGGTGGCGG CCGGCAACGT ACTGATGCAC
AAACGCTCGC GCAAGCCGCT GCACGACGTG ATGACGGCCA TCAGGCTGGG CAGGCCGGTG
CACGAATGCG GCTTTGCGCT GCAGGCCAAT GCCGAGGCGC ACCTGCGCCC GCGCATGCGG
CTGGCCGACA TTTACCCGGC CGGGCTGCTG CGTGCCACGC TGGAGGTGGC GGCACGCTGT
AGCTTCAACC TCGACGAGAT CCGCAACCTG TACCGCTACC CCCGGGAAGA CATGGTGCCG
CCTGCCGAAA CGCCTGCACG GTGGCTCAGG CGGTTGACCT GGCAGGGGGC CCACACACGC
TATCCGCGCG GCATTCCCCG CAAGGTCAGG AAGCAGCTGG GATTCGAGCT GGCCCTGATC
GAAGAGCTTG AATACGAGAT GTTCTTCATC ACCGTGCACG ACATCGTGCG GTTTGCGAAT
GAGCAGAAAA TCCTGTGCCA GGGGCGCGGC TCGGCGGCCA ATTCGGCAGT CTGCTACTGC
CTGGGCGTCA CGGCCGTCAA CCCGGCTGAA AGCAAACTGC TGTTTGAGCG CTTCATCAGT
CGCGAACGCC GCGAGCCGCC TGACATCGAC GTGGACTTCG AGCACGAGCG GCGCGAAGAG
GTCATCCAGT ATATCTACGG CAAATACGGC CACGACCGCG CCGCCATTGC CGCCACCGTC
ATCCGCTATC GGCCGCGCAG CGCGATTCGC GATGTGGGAA AGGCGCTGGC GATGGCGCCC
GGGCTGATCG AGCAGTTCGC CAAAGAGCAT TTCTGGTTTG ACGGCAGCGA GGTGCTGGAA
GAAAAAATCA GGCAAGCCGG CCTGGCGGGC AGGGTGGGGC CGGTGTTGCA GTGGCTTGAT
TTGTCGGCGC AACTGATTGG CTTTCCGCGC CACCTGAGCC AGCACGTGGG CGGCTTTGTG
CTCACGCAGG GCAAGCTCAC GCGGCTGGTG CCGGTGCAAC CTGCCTCGAT GGAAGACCGC
CGCATCATCC AGTGGGACAA GGACGACCTG GAGGCGATGG GTTTGCTCAA GGTCGATGTG
CTGGCGCTGG GCATGCTGTC GGCCATTCGG CGCTGCCTGG CGATGGTGAA CCAGACGCGA
GGCAGCCAGT TGCAGATGCA CCAGATCGCG CCGGACGAAG TGACCTACGA CATGATCTGC
GAGGCCGACA CGGTGGGCGT GTTCCAGATC GAGAGCCGCG CGCAGATGTC CATGTTGCCG
CGGCTGCAGC CGCGCAGCTA CTACGACCTG GTCGTCGAGG TCGCCATCGT GCGGCCCGGC
CCCATCCAGG GCGGCATGGT GCATCCTTAC CTGAAAAACC GCGAAATCCT CAGGAACGGC
GGCGAGATCA AGCCCGAGTA CCCGGCGCTC AACCCGGCAC TGGAGCGCAC GCTGGGCATT
CCGATCTTCC AGGAGCAGGT GATGCAGATC GCCATGATCG CCGCCGACTT CACGCCCGGC
GAGGCCGACG ATCTGCGCCG CTCCATGGCC GCCTGGAAGC GCAAGGGCGG GGTGGATCGC
TTTCATGGCC GCCTGGTCAA TGCCATGGTC AACAACGGCT ACAGCGCCGA ATTTTCAGAG
CGCATCTTCA GCCAGATCCT GGGCTTCGGA GACTACGGCT TCCCTGAAAG CCACGCCGCC
AGCTTCGCCA AGCTGGTCTA CGTGAGCTGC TGGCTCAAGT GCCACGAACC GGCCTGCTTT
CTGGCGGCCA TGGTCAATTC ACAGCCCATG GGCTTTTATT CGCCTTCGCA ACTGGTGCAG
GACGCCGTCC GGCATGGCGT GGAAGTGCGC GCCGTGGATG TCATGCACAG CGACTGGGAC
TGCACGCTGG AGCCTGCTGA AAACAAGGCC CTGCCGCAAC ACCCGGGCAT TTACCCGGGC
ATCAAGGAAA ACCAGCCCGC CGTCCGCCTC GGTTTGCGCC TGGTGTCCGG CCTGCGCGAA
GACGCTGCCA TTCGTCTGGT GGAGGCGCGA GCGCAGGCGG CTTTCAGCTC GACGGAAGAC
CTGGTGTCGC GCGCCCGGCT CAATACGCTG GAAATCAACG CGCTGGCCGC TGCCGATGCC
TTGCTGCCCT TGTCCGGCCA CCGGCGCCAG CAGGTGTGGG ACGCCTCGGC CATCAAACCG
GCGCCGGGCT TGCTCAAGTC CGTGCCCACG CATGAAACAC CGCTTGAGCT GCCCGACACG
CCCGAGGGCG AAAACATCCT GTTCGACTAC CAGGCCACCG GCCTCACGCT GCGGCGCCAC
CCGGTCGCGC TGCTGCGGGA ACGGCTGGCG CGCAAGGGCC TGCTGAGCGC CAGCGAGCTC
AATGCCTTGC CCGACGGCGA AGAGGTGGCC GGCTGCGGCA TCGTCACCGT GCGCCAGCAG
CCGCAAACGG CCAATGGCAC CATCTTCGTC ACGCTGGAAG ACGAAACCGG CCCGGTCAAC
GTGATCGTGT GGAAATCATT GCGGGAGGCG CAACGCGCCG AGGTGCTGTA TGCCCGCCTG
CTGGCGGTGT ACGGCGTGTG GCAGCGCAGT GAAGAAAGCG GCACCGCCAA AGGCTATGGC
GCAGTGCGCA ACCTGGTGGC GCACCGGCTG GAAGACCTCA CGCCGCTGCT GGGGCGGCTG
GGCACCTCCA GCCGCGACTT TCATTGA
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| Protein sequence | MSSYVLPDYA ELHALSNFSF QRGASHAQEL AERAFKLGYK ALAITDECSV AGVVRAHEVT
RELGLQLLPG AEFLVQAANA FRLVVLPHNA AGWGNLCEFI TEARRAGDEV DKGSYRVVLG
ETDFSRLADC EILLSPLPDA IHTQALCAHA EWATGLFGPN AWLAVELLQG LDDALRLQQL
QEVAGHTGIR LVAAGNVLMH KRSRKPLHDV MTAIRLGRPV HECGFALQAN AEAHLRPRMR
LADIYPAGLL RATLEVAARC SFNLDEIRNL YRYPREDMVP PAETPARWLR RLTWQGAHTR
YPRGIPRKVR KQLGFELALI EELEYEMFFI TVHDIVRFAN EQKILCQGRG SAANSAVCYC
LGVTAVNPAE SKLLFERFIS RERREPPDID VDFEHERREE VIQYIYGKYG HDRAAIAATV
IRYRPRSAIR DVGKALAMAP GLIEQFAKEH FWFDGSEVLE EKIRQAGLAG RVGPVLQWLD
LSAQLIGFPR HLSQHVGGFV LTQGKLTRLV PVQPASMEDR RIIQWDKDDL EAMGLLKVDV
LALGMLSAIR RCLAMVNQTR GSQLQMHQIA PDEVTYDMIC EADTVGVFQI ESRAQMSMLP
RLQPRSYYDL VVEVAIVRPG PIQGGMVHPY LKNREILRNG GEIKPEYPAL NPALERTLGI
PIFQEQVMQI AMIAADFTPG EADDLRRSMA AWKRKGGVDR FHGRLVNAMV NNGYSAEFSE
RIFSQILGFG DYGFPESHAA SFAKLVYVSC WLKCHEPACF LAAMVNSQPM GFYSPSQLVQ
DAVRHGVEVR AVDVMHSDWD CTLEPAENKA LPQHPGIYPG IKENQPAVRL GLRLVSGLRE
DAAIRLVEAR AQAAFSSTED LVSRARLNTL EINALAAADA LLPLSGHRRQ QVWDASAIKP
APGLLKSVPT HETPLELPDT PEGENILFDY QATGLTLRRH PVALLRERLA RKGLLSASEL
NALPDGEEVA GCGIVTVRQQ PQTANGTIFV TLEDETGPVN VIVWKSLREA QRAEVLYARL
LAVYGVWQRS EESGTAKGYG AVRNLVAHRL EDLTPLLGRL GTSSRDFH
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