| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_2370 |
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| Symbol | |
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| ID | 4014984 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 2463431 |
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| End bp | 2464993 |
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| Gene Length | 1563 bp |
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| Protein Length | 520 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637942036 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | YP_549189 |
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| Protein GI | 91788237 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.236919 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.7616 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGGGTA ACGCGCAATC TCCTTGTGAC AAAGGAGTCA TTCAGGCACA ACGCAGCTTG
CCCAGCACTT CCTTGGCCCC TTCCCTACTG ACTTCGCAGC CCTCTTCTGC CGGTGCAGAC
GCCGCCGCCC GAAAAGGCTA TGCCCTGGCC GCCACCGTCC TCGGTTCGTC CATGGCCTTC
ATCGACGGCT CGGTCGTCAA CATTGCCCTG CCCGCCATCC AGCGCGACTT TGCCAGTAGC
GCCGGCGCCA GCCTGGCGGC CATGCAGTGG GTCATCAACG CCTATCTGCT GGCGCTGGGT
TCGCTAGTGC TGGTGGGCGG CTCGCTGGGG GACAGGTTCG GGCGGCGCAG CATTTTCATC
ACCGGCATTG CGCTTTTTAC CGCCGCGTCG GCGGCCTGCG GGCTGGCCTC CGGCACGCTG
GCCCTGATTG CCGCGCGGGC GCTGCAGGGC GTGGGCGCGG CGCTGCTGGT GCCAGCCAGC
CTGGCCATTA TTGGCAACGT ATTTGAAGGC GACGCACGCG GCAAGGCGAT TGGCGCTTGG
GCGGCGTGGG CGTCCATCAC GGGTGCGGCG GGTCCGGTGC TGGGCGGCTG GCTGGTCGAT
GCAGTGTCGT GGCGCGCCAT CTTTTTTCTG AACGTACCGC TGGCCGTGGC CACCATCTGG
CTGGCCGTCT ATGCCGTGCC CGACAGCCGC GACCCCGATG CGCCGCGGCA TTTCGACTGG
CTCGGTGTGT TGCTGGTGGC CAGCGGGCTG GGTGCCCTCA CCTATGGGCT GACACTGGCG
CCCGAGCGCG GATGGGGCCA CGCGAGCGTG CTGTGGCCCC TGGTGTTGGG CGTAGTCGGG
CTGGCTGCTT TTGCCGTGGC GCAGGCGCGG GTGCGTGCGC CCATGATGCC GCCGGCGCTT
TTCAGGTCGC GCGACTTTGT CGGTGCCAAT CTGCTGACAC TGCTGCTGTA CTTTGCGCTG
GTCGGCGTGC TGTTTTTTCT GCCCTTTGTG CTGATTGGCG CCTTCCGCTA TTCGGCCACC
GCAGCGGGTG CCACGCTGCT GCCCTTCTCC ATCATTTTGG GCTTGCTGTC CTCTGCGGCC
GGCAAGGCCA TGGATCGTTT TGGCGCCAGG CTCATGCTTA TCTGCGGTCC GGTGATCGCC
GCTGCCGGCC TGGCGTTGAT GGCGCTGCCG GGTGTGGGCT GGCCTTACTG GGCGGGCTTT
TTTCCGGCCA TGGTGGTGCT GGGCCTGGGC ATGACGATTG CCATTGCACC GCTCACCACC
ACCGTGATGA ACGCGGTGTC GCCGGCCCAC GCCGGGGTGG CCTCGGGCGT GAACAACGCG
GTGGCGCGGG TGGCGGGCTT GCTCGCAGTG GCCGTGCTGG GTGTGGTGTT TGCCGCTGCC
TTGGGCGGGC CCCTGGACGG CGCACCCGCG ACTACGCTGA TCCACGCGTT TCGCTGGGTG
GTGCTGGCAG CCGTGCTGTG CGCGCTGGCC TCGGCAGCCT GTGCGGCCAT GTTTTTAACG
CCTGCACCCG CGCCAGTTAC AAAACGCAAG CCTGTCAGAA CCCGGCCAGC ACCGCCCCCT
TGA
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| Protein sequence | MLGNAQSPCD KGVIQAQRSL PSTSLAPSLL TSQPSSAGAD AAARKGYALA ATVLGSSMAF
IDGSVVNIAL PAIQRDFASS AGASLAAMQW VINAYLLALG SLVLVGGSLG DRFGRRSIFI
TGIALFTAAS AACGLASGTL ALIAARALQG VGAALLVPAS LAIIGNVFEG DARGKAIGAW
AAWASITGAA GPVLGGWLVD AVSWRAIFFL NVPLAVATIW LAVYAVPDSR DPDAPRHFDW
LGVLLVASGL GALTYGLTLA PERGWGHASV LWPLVLGVVG LAAFAVAQAR VRAPMMPPAL
FRSRDFVGAN LLTLLLYFAL VGVLFFLPFV LIGAFRYSAT AAGATLLPFS IILGLLSSAA
GKAMDRFGAR LMLICGPVIA AAGLALMALP GVGWPYWAGF FPAMVVLGLG MTIAIAPLTT
TVMNAVSPAH AGVASGVNNA VARVAGLLAV AVLGVVFAAA LGGPLDGAPA TTLIHAFRWV
VLAAVLCALA SAACAAMFLT PAPAPVTKRK PVRTRPAPPP
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