| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_2361 |
|---|
| Symbol | |
|---|
| ID | 4014975 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | - |
|---|
| Start bp | 2455367 |
|---|
| End bp | 2456635 |
|---|
| Gene Length | 1269 bp |
|---|
| Protein Length | 422 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637942027 |
|---|
| Product | DEAD/DEAH box helicase-like |
|---|
| Protein accession | YP_549180 |
|---|
| Protein GI | 91788228 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
|---|
| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.122997 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCATTTT CTTCACTGGG CTTCTCGCCG GCGCTTTTGC CCGCTTTTCT GCGCGCCATT
GGCGACAAAG GCTACCGTGC ACCCACCGCC ATTCAGTCGC AAGCCATTCC GGCGATCCTG
CTGGGGCGCG ACGTGGTGGG GTCCGCCCAA ACGGGCTCGG GCAAAACAGC CGCCTTTGCA
TTGCCCATGC TGCAGCAACT GGCAAACGCG CCCACTGGAA CACCACGGCC TACCCGGGGC
CTGATCCTGG TGCCCACGCG CGAGCTGGCG GCGCAGGTGG GTGAAGCCAT CGCCGGCTTT
GCCAAATACC TGCCGCAGCG CGTCAAGGTG GCCGTGGTGT TTGGCGGCGT GTCCATCAAT
CCGCAAATGA TGAACCTGCG CGGCGGCGCG GACATCGTAG TGGCCACGCC GGGCCGCCTG
CTCGACCTGC TCGAACACAA TGCGCTGAAA ATTTCTGAGG TAAGCACTTT GGTGCTGGAC
GAGGCAGACC GCCTGCTGGA TCTGGGCTTT GGCGAAGAAC TGGGCCGCAT CCTGGAGTTG
CTTCCACCCC GGCGCCAAAA CCTCTTTTTC TCGGCGACGT TCCCGCCAGC CATCGAGGTG
CTGGCTGAAA GCATGCTGCA CGACCCGCTG CGCATTGAAG TGCAGGCGGT GCCCGAGACC
AAACCCGACA TCGCGCAGCG CGCCATTCAA GTCGATGCCA GCCGCCGGAC GCAACTGCTG
CGCCACCTGG TGCAAACCGA GAAGTGGGAA CGCGCGCTGG TGTTTGTGGC GACCAAACAC
GCCGCAGAAA TCGTGGCAGA CAAACTGCGT AAAGTGCACA TCGAGGCCGA GCCCTTTCAT
GGCGAGCTGA GCCAAGGCAA GCGCACCCAG GTCTTGCAGG ACTTCAGGAT CAAGGCCGTG
CAGGTGGTGG TGGCTACCGA CGTGGCCGCA CGCGGCATCG ACATTGCGCA GATGCCGGTG
GTGGTGAACT ACGATTTGCC CCGCTCAGCG GTGGACTACA CGCACCGCAT TGGGCGGACT
GGACGTGCGG GTGAAAGCGG GCTGGCTGTG AGTTTTGTGA GTGCGGGCAC TGAAGCGCAC
TTCAAGCTGA TCGAAAAGCG CCAGGGTATC AAGGTGCAGC GCGAGCAGGT TGAAGGATTT
GAGCCACTTG AAACGCTGGC GCCCAATGCT GCCGACCCTG CCTCCACCGG TGGCATCAAG
GGCAAGCGCC CGAGCAAGAA AGACAAGCTG CGGGAAGCGG CCGCACGCGC GCAGACGCAG
GATAAATAA
|
|---|
| Protein sequence | MPFSSLGFSP ALLPAFLRAI GDKGYRAPTA IQSQAIPAIL LGRDVVGSAQ TGSGKTAAFA
LPMLQQLANA PTGTPRPTRG LILVPTRELA AQVGEAIAGF AKYLPQRVKV AVVFGGVSIN
PQMMNLRGGA DIVVATPGRL LDLLEHNALK ISEVSTLVLD EADRLLDLGF GEELGRILEL
LPPRRQNLFF SATFPPAIEV LAESMLHDPL RIEVQAVPET KPDIAQRAIQ VDASRRTQLL
RHLVQTEKWE RALVFVATKH AAEIVADKLR KVHIEAEPFH GELSQGKRTQ VLQDFRIKAV
QVVVATDVAA RGIDIAQMPV VVNYDLPRSA VDYTHRIGRT GRAGESGLAV SFVSAGTEAH
FKLIEKRQGI KVQREQVEGF EPLETLAPNA ADPASTGGIK GKRPSKKDKL REAAARAQTQ
DK
|
|---|
| |